Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bigemina_20[genbank_20GCA_5F000981445.1_202014-06-13] 483 sequences; 13,840,936 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq5 150 2e-31 >seq5 Length=493739 Score = 150 bits (166), Expect = 2e-31 Identities = 826/1305 (63%), Gaps = 36/1305 (3%) Strand=Plus/Minus Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766 ||||||||| |||||||||| ||||| |||| || || || | ||| |||| || || Sbjct 439589 GTAGATGTTACTTGTGTATGGCTCAAAAGATTCGTTGTTTCCAAGGATCTGTGATGTCGA 439530 Query 110767 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTG--ATGCGT 110824 || || ||||| ||||| | || || || || | || | | ||| ||||| Sbjct 439529 CGCAGTCGGCATAGGTGCGAGGAATAGCGAATTGCGCAATCCGTGTT--TTGCCATGCGA 439472 Query 110825 TCCTTGAGAACATCCCAGTCGTAGTTGAGCTTGGTTTC------ACCTTCCCACATGTCA 110878 ||| || | ||||| || | | || | || | | |||| | ||| Sbjct 439471 CGCTTAAGGTCGTCCCAATCCCAC---AATTTATTATCCACAGTAGCGCCCCAAAGGTCG 439415 Query 110879 AACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCT 110938 ||||| ||| || || || || ||||| || | | || ||||| | || | | Sbjct 439414 AACTGGAGCTTGCCCTGTGATGCTGGAGAGCCTTGGTACGTCTCATATGGGCCATCGCGC 439355 Query 110939 TCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCA 110998 || |||| | | | | ||||| | ||| || || |||||||| || ||| | Sbjct 439354 TCCGCCAGCGAAATGGACTCATCCAGACAACCGTAGTAGATTGTTTCAAAAATGCGACGA 439295 Query 110999 TTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCG 111058 |||| ||| ||||| || || || || |||| ||| || | || || || || Sbjct 439294 TTCAACTCTTTGGCCTCCTCAGACTCGAATGGGTACCGCATGAGCATGAACGTGTCGGCC 439235 Query 111059 AGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACT--TTCGCGCAGTCT 111116 ||||| || ||||| | ||| ||||||| ||| || || ||| ||||| | | Sbjct 439234 AGACCCTGGACACCGACACCGATAGGTCGGTGGCGATGGTTGGACACCTTCGC-CTCTGG 439176 Query 111117 CAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGA 111176 | |||| || | || |||||||||| | ||| || || | || | | | | Sbjct 439175 TACCGGG-TAGTAGTTCCTGTCAATGATTTTGTTGAGGTTGTACGTGATGACACGGGCTA 439117 Query 111177 TTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGG 111236 || | ||||| | | | ||| |||| || || | || |||||| | || || | Sbjct 439116 CCTCGTAGAGTTTCTTAAAGTCATAAGTCTTCGTTTCCTTGTTCACATACATAGGCAGCG 439057 Query 111237 CGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTG 111296 | || || |||| |||||| || || |||||| ||||||| | ||||| Sbjct 439056 CAATGGAAGCCAGATTGCACACCGCAACTTCATCCGGTGACGTGTACTGCACGATTTCAC 438997 Query 111297 TACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACG 111356 || | || ||| ||| || ||||| | || | |||||| |||| |||||| | Sbjct 438996 AGCAGAGATTTGAAGACTTGATGGTCCCAAGGTTTTGTTGGTTCGACTTCGCGTTGCAAG 438937 Query 111357 CATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCC 111416 |||| |||||||||||| | || || || || || |||| | ||| || || || Sbjct 438936 CATCTTTGTAGAGCATGAACGGAGTTCCTGTTTCGATCTGGCTCTGGAGTATGGCGAACC 438877 Query 111417 AAACATCGGCGGCTGGTACA---ATGGCGTT--GGCCCGTCCCT-CCGCCTCGTACTTTG 111470 | | ||| |||| || || | || | ||| | || || ||||||||| | Sbjct 438876 AGA-----GCGACTGGG-CAGGGATAGTCTTACGACCCATGCCGGCCTTCTCGTACTTGG 438823 Query 111471 TGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTG-TCTGGA 111529 | || || | || ||||| || ||| | ||| | ||||| | || || || || Sbjct 438822 TATACAGCTCCTCGAACTCGTCTCCCCAGACCTCGTAAAGACCACG-GCATTCATCCGGG 438764 Query 111530 CAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCAC 111589 || | | | ||| | || | || || |||||||||||||| || |||||||| Sbjct 438763 CACATCAACGTCCAATCGCCGTTGGCTTCCACACGCTTCATGAAAAGATCAGGAATCCAG 438704 Query 111590 AGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCA 111649 || | |||| || || | |||| || || | || || || || || || Sbjct 438703 AGCGCATAAAACAGGTCACGTGCGCGAGTGTCCTCCGCGCCGTGATTCTTGCGCAAATCC 438644 Query 111650 AGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCG- 111708 | || ||||||||||| |||||||| ||||| || || | || | ||| ||||| || Sbjct 438643 AAAAAGTCCATGATATCAGCGTGCCACGGCTCCAGGTAAATGGCAAAAGAGCCCTTGCGC 438584 Query 111709 --ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATA 111766 || ||| |||| | ||| |||||||| || || ||||| | || | ||| || | | Sbjct 438583 TTACCGCCACCTTGGTCTACGTAGCGCGCGGTTGCATTAAAAATACGCAACATGGGCACA 438524 Query 111767 ATACCATCTGAT-TGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATG 111825 ||||| | || | | ||| ||||| || ||||| | |||| || | | || Sbjct 438523 ATACCGT-TGCTCTTACCGTTTGTGCCGCGAATGTAGGCGCCGCTGGCCCTGATTTTGTG 438465 Query 111826 GATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCC 111885 | || || || || ||||| ||||| ||| ||||| | || | || | Sbjct 438464 GCACGACAGGCCGATGCCACCAGCGCACTTGCTGATGAAGGCACATTGTGTCAACGTGTC 438405 Query 111886 ATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGG 111945 | || || | || || ||||| || | | | ||||||||| ||||| || || Sbjct 438404 GAATATTCCAGACAGCGAATCATCCTTCATGTCCAGCAAGAAGCAACTAGACATTTGGGG 438345 Query 111946 TCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAA 111990 ||| | || |||| | |||||| || || |||||||| |||| Sbjct 438344 CCTTTGAGTTCCAGAAAAGAAGAGCGTGGGAGTTGCGTGTGTGAA 438300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628028208256800