Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bigemina_20[genbank_20GCA_5F000981445.1_202014-06-13] 483 sequences; 13,840,936 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq5 192 7e-44 >seq5 Length=493739 Score = 192 bits (212), Expect = 7e-44 Identities = 839/1306 (64%), Gaps = 40/1306 (3%) Strand=Plus/Minus Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241 ||||| || | |||||||||||||| | || ||||| || | ||| || | ||| || Sbjct 439588 TAGATGTTACTTGTGTATGGCTCAAAAGATTCGTTGTTTCCAAGGATCTGTGATGTCGAC 439529 Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCT--TTTCCCTAATGCGTT 118299 || || ||||| ||||| | || || || || | || | ||| || ||||| Sbjct 439528 GCAGTCGGCATAGGTGCGAGGAATAGCGAATTGCGCAATCCGTGTTTTGCC--ATGCGAC 439471 Query 118300 CCTTGAGAGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCT----GCCACATA--TCAA 118353 ||| || ||||||| || | | || | ||| | ||| || | || | Sbjct 439470 GCTTAAGGTCGTCCCAATCCCAC---AATTTATTATCCACAGTAGCGCCCCAAAGGTCGA 439414 Query 118354 ACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCT 118413 ||||||| | || || || ||||| || || | | |||||||||||||| || || Sbjct 439413 ACTGGAGCTTGCCCTGTGATGCTGGAGAGCCTTGGTACGTCTCATATGGGCCATCGCGCT 439354 Query 118414 CCGCCAATTCGGA--GCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGC 118471 |||||| || | | | | || || ||| || |||||||||||||||||| Sbjct 439353 CCGCCAG--CGAAATGGACTCATCCAGACAACCGTAGTAGATTGTTTCAAAAATGCGACG 439296 Query 118472 ATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGC 118531 ||||| | |||||||| || || || || | | || | || || || || Sbjct 439295 ATTCAACTCTTTGGCCTCCTCAGACTCGAATGGGTACCGCATGAGCATGAACGTGTCGGC 439236 Query 118532 GAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTC 118591 ||||| |||||||||| || || || || || | || ||| | || ||| Sbjct 439235 CAGACCCTGGACACCGACACCGATAGGTCGGTGGCGATGGTTGGACACCTTCGCC-TCTG 439177 Query 118592 C-ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGA 118650 || || || | ||||| || || | | || || || | |||| || | | Sbjct 439176 GTACCGGGTAGTAGTTCCTGTCAATGATTTTGTTGAGGTTGTACGTGATGACACGGGCTA 439117 Query 118651 TTTCATGAAGCTTTTCGTAA--TCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAG 118708 || | || |||| ||| ||| || | || || | || |||||| |||| || Sbjct 439116 CCTCGTAGAG--TTTCTTAAAGTCATAAGTCTTCGTTTCCTTGTTCACATACATAGGCAG 439059 Query 118709 GGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTC 118768 || || || |||||||| ||||| | |||||| ||||||| | ||||| Sbjct 439058 CGCAATGGAAGCCAGATTGCACACCGCAACTTCATCCGGTGACGTGTACTGCACGATTTC 438999 Query 118769 CGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACA 118828 ||| | |||||| ||| ||||| || | ||| | ||| || ||||| | ||| || Sbjct 438998 ACAGCAGAGATTTGAAGACTTGATGGTCCCAAGGTTTTGTTGGTTCGACTTCGCGTTGCA 438939 Query 118829 CGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTT 118888 ||||| ||||| |||||| | || || || || || | ||| || ||| || || Sbjct 438938 AGCATCTTTGTAGAGCATGAACGGAGTTCCTGTTTCGATCTGGCTCTGGAGTATGGCGAA 438879 Query 118889 CCAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTC---GCCCCTCTTCCTCGTACTTTG 118944 ||||| | | | || || | ||| | | | | ||| |||| |||||||| | Sbjct 438878 CCAGAGCGACTGG-GCAGGGATAGT--CTTACGACCCATGCCGGCCTTC-TCGTACTTGG 438823 Query 118945 TGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTT-ATCTGGG 119003 | || || | || ||||| || ||| | |||| | || || | || || ||| ||| Sbjct 438822 TATACAGCTCCTCGAACTCGTCTCCCCAGACCTCGTAAAGACCACG-GCATTCATCCGGG 438764 Query 119004 CAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAG 119063 || | | | ||| | || | || || ||||||||||| || || || |||||| Sbjct 438763 CACATCAACGTCCAATCGCCGTTGGCTTCCACACGCTTCATGAAAAGATCAGGAATCCAG 438704 Query 119064 AGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCC 119123 ||||| | || || || || ||||| || || | || ||||| ||||| ||| Sbjct 438703 AGCGCATAAAACAGGTCACGTGCGCGAGTGTCCTCCGCGCCGTGATTCTTGCGCAAATCC 438644 Query 119124 AAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG- 119182 ||||||||||||||||| ||||||||||| |||||||| | || | || ||||| || Sbjct 438643 AAAAAGTCCATGATATCAGCGTGCCACGGCTCCAGGTAAATGGCAAAAGAGCCCTTGCGC 438584 Query 119183 --ACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATG 119240 || ||| | |||| ||| || | ||| || || ||||| | ||| | ||| || | Sbjct 438583 TTACCGCCACCTTGGTCTACGTAGCGCGCGGTTGCATTAAAAATACGCAACATGGGCACA 438524 Query 119241 ATACCATCGGATTGGCCATTTGTCCCCCGAA--TACGAGACTTATTGGCTCTGACATCGT 119298 ||||| | | | || ||||| || |||| || | | | |||| |||| | || Sbjct 438523 ATACCGTTGCTCTTACCGTTTGTGCCGCGAATGTAGGCGCC--GCTGGCCCTGATTTTGT 438466 Query 119299 GGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGC 119358 || || || || || || || ||||| ||| || || | || | || Sbjct 438465 GGCACGACAGGCCGATGCCACCAGCGCACTTGCTGATGAAGGCACATTGTGTCAACGTGT 438406 Query 119359 CGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAG 119418 || | || ||| | ||| ||| |||| | | | | |||||| || |||||||| | Sbjct 438405 CGAATATTCCAGACAGCGAATCATCCTTCATGTCCAGCAAGAAGCAACTAGACATTTGGG 438346 Query 119419 GCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAA 119464 |||| | || |||| |||||| || || || ||||| |||| Sbjct 438345 GCCTTTGAGTTCCAGAAAAGAAGAGCGTGGGAGTTGCGTGTGTGAA 438300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618431466197480