Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bigemina_20[genbank_20GCA_5F000981445.1_202014-06-13] 483 sequences; 13,840,936 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq5 185 1e-41 >seq5 Length=493739 Score = 185 bits (204), Expect = 1e-41 Identities = 737/1141 (65%), Gaps = 33/1141 (3%) Strand=Plus/Plus Query 104315 TTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGT 104374 |||| |||||||| || || |||||| | |||| || | ||| ||||||||||| ||| Sbjct 438300 TTCACACACGCAACTCCCACGCTCTTCTTTTCTGGAACTCAAAGGCCCCAAATGTCTAGT 438359 Query 104375 TGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAG 104434 |||||| | | | || ||||| || || | || || | | || | || | Sbjct 438360 TGCTTCTTGCTGGACATGAAGGATGATTCGCTGTCTGGAATATTCGACACGTTGACACAA 438419 Query 104435 TGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCC 104494 ||||| ||| ||||| ||||| || || || || ||| | | || ||| Sbjct 438420 TGTGCCTTCATCAGCAAGTGCGCTGGTGGCATCGGCCTGTCGTGCCACAAAATCAGGGCC 438479 Query 104495 AATAAATCTCGTATTCGGGGGACAAATGGTCA-ATCAGATGGTATTATTCCAATGCTTCG 104553 | | ||||| || ||||| ||| | | || | |||||| | || ||| | || Sbjct 438480 AGCGGCGCCTACATTCGCGGCACAAACGGTAAGAGCA-ACGGTATTGTGCCCATGTTGCG 438538 Query 104554 CGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCTGGGCGT---CGAAAGGGATCTAT 104610 | ||||| || || |||||||| ||| | |||| ||| || || ||||| ||| | Sbjct 438539 TATTTTTAATGCAACCGCGCGCTACGTAGACCAAGGTGGCGGTAAGCGCAAGGGCTCTTT 438598 Query 104611 CGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAA 104670 || | || || ||||| |||||||| ||||||||||| || | || ||||| || Sbjct 438599 TGCCATTTACCTGGAGCCGTGGCACGCTGATATCATGGACTTTTTGGATTTGCGCAAGAA 438658 Query 104671 CCAAGGTGACGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCT 104730 || || | ||||| | || || || || || | || ||||||||||| ||||| Sbjct 438659 TCACGGCGCGGAGGACACTCGCGCACGTGACCTGTTTTATGCGCTCTGGATTCCTGATCT 438718 Query 104731 CTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGA-CAAGGCAC 104789 ||||||||| | || || | | ||| ||||| | | | || || || || || | Sbjct 438719 TTTCATGAAGCGTGTGGAAGCCAACGGCGATTGGACGTTGATGTGCCCGGATGAATGC-C 438777 Query 104790 CTGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAG 104849 |||||| | ||| | | ||| || ||||| || | || || || ||||||||| | | Sbjct 438778 GTGGTCTTTACGAGGTCTGGGGAGACGAGTTCGAGGAGCTGTATACCAAGTACGAGAAGG 438837 Query 104850 AAGG--TCGGGCGACTGCGACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGT 104906 || | || || | ||| | || || | | | | ||| || || ||| || Sbjct 438838 CCGGCATGGGTCG--TAAGACTATCCCTGC-CCAGTCGCTCTGGTTCGCCATACTCCAGA 438894 Query 104907 CTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTA 104966 || | ||| || || || || | |||||| |||||||| || || ||| ||| | Sbjct 438895 GCCAGATCGAAACAGGAACTCCGTTCATGCTCTACAAAGATGCTTGCAACGCGAAGTCGA 438954 Query 104967 ATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTA 105026 | ||| | || | || |||||| ||| |||||||| |||||| || | | | Sbjct 438955 ACCAACAAAACCTTGGGACCATCAAGTCTTCAAATCTCTGCTGTGAAATCGTGCAGTACA 439014 Query 105027 CAGACA-AAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTG 105085 | | || ||||| || ||||| || || || || || || || || | ||||||| Sbjct 439015 C-GTCACCGGATGAAGTTGCGGTGTGCAATCTGGCTTCCATTGCGCTGCCTATGTATGTG 439073 Query 105086 GATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACC 105145 | || || ||||| | ||| | | | |||||| |||| || | ||||| | Sbjct 439074 AACAAGGAAACGAAGACTTATGACTTTAAGAAACTCTACGAGGTAGC---CCGTGTCATC 439130 Query 105146 A---AAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGT---TGAGACTGCTCGT 105199 | | ||||| |||| | | ||||| || || | ||||| || ||| | | || Sbjct 439131 ACGTACAACCTCAACAAAATCATTGACAGGAACTACTACCCGGTACCAGAGGC-GAAGGT 439189 Query 105200 AAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTC 105259 || || | ||||| || || ||| ||||||| |||||||| || || ||| Sbjct 439190 --GTCCAACCATCGCCACCGACCTATCGGTGTCGGTGTCCAGGGTCTGGCCGACACGTTC 439247 Query 105260 ATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTT 105319 || || || || |||| || || || || || || || | ||| ||||| ||| Sbjct 439248 ATGCTCATGCGGTACCCATTCGAGTCTGAGGAGGCCAAAGAGTTGAATCGTCGCATTTTT 439307 Query 105320 GAGACCATGTATCACGCCGCTCT---TGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGT 105376 || || || || ||| ||| |||| | | ||| | |||| ||| ||||| Sbjct 439308 GAAACAATCTACTACGGTTGTCTGGATGAGTCCATTTC---GCTGGCGGAGCGCGATGGC 439364 Query 105377 CCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGG 105436 |||||||| || | | || |||||||| ||||| || ||| || || || | ||| Sbjct 439365 CCATATGAGACGTACCAAGGCTCTCCAGCATCACAGGGCAAGCTCCAGTTCGACCTTTGG 439424 Query 105437 G 105437 | Sbjct 439425 G 439425 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583257278562920