Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bigemina_20[genbank_20GCA_5F000981445.1_202014-06-13] 483 sequences; 13,840,936 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq5 96.9 5e-15 >seq5 Length=493739 Score = 96.9 bits (106), Expect = 5e-15 Identities = 211/312 (68%), Gaps = 8/312 (3%) Strand=Plus/Minus Query 77913 GTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGG 77972 ||||| ||| || || || |||||||| || || | | ||| ||||||||| ||| Sbjct 438823 GTATACAGCTCCTCGAACTCGTCTCCCCAGACCTCGTAAAGACCACGGCATTCATCCGGG 438764 Query 77973 CACATCAATGACCAGTCACCAT---CTTCCTTAACTCGTTTCATAAAGAGATCAGGTATC 78029 |||||||| | ||| || || | ||||| || || ||||| || |||||||| ||| Sbjct 438763 CACATCAACGTCCAATCGCCGTTGGCTTCC---ACACGCTTCATGAAAAGATCAGGAATC 438707 Query 78030 CATAGAGCAATAAATAGATCTCGGGTTCTA-TGTTCTTCATTTCCTGTATTCTTTTTAAG 78088 || || ||| ||| || || || | | | ||| || | | || |||||| | Sbjct 438706 CAGAGCGCATAAAACAGGTCACGTGCGCGAGTGTCCTCCGCGCCGTG-ATTCTTGCGCAA 438648 Query 78089 ATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGG 78148 ||| | ||| ||||| ||||||| ||||| || || || || || || | | || Sbjct 438647 ATCCAAAAAGTCCATGATATCAGCGTGCCACGGCTCCAGGTAAATGGCAAAAGAGCCCTT 438588 Query 78149 TCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGG 78208 || ||| || || || |||| || | ||||| |||| ||| | |||||| || Sbjct 438587 GCGCTTACCGCCACCTTGGTCTACGTAGCGCGCGGTTGCATTAAAAATACGCAACATGGG 438528 Query 78209 AATAATACCGTT 78220 | ||||||||| Sbjct 438527 CACAATACCGTT 438516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694664605937120