Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bigemina_20[genbank_20GCA_5F000981445.1_202014-06-13] 483 sequences; 13,840,936 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq1 161 9e-35 >seq1 Length=2541256 Score = 161 bits (178), Expect = 9e-35 Identities = 159/203 (78%), Gaps = 2/203 (1%) Strand=Plus/Plus Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693 |||| || || || || | |||||| || || |||||||||||||| ||||| ||||||| Sbjct 1681886 CGCCACCACGCAGGCGGAGCACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGG 1681945 Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGG 41753 |||||||||| |||| |||||||||||||||||||| ||||| ||||| ||||||| || Sbjct 1681946 AGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGGTCCGGGG 1682005 Query 41754 GAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCC 41812 | | || |||||||||| || | || || | ||| | | |||||| || | ||| Sbjct 1682006 GGATGCCCTCCTTGTCC-TGGATCTTGGCCTTAACATTTTCGATAGTGTCACTGGGCTCA 1682064 Query 41813 ACCTCCACCGTTATCGTTTTACC 41835 || |||| ||| || ||||| || Sbjct 1682065 ACTTCCAACGTAATGGTTTTGCC 1682087 Score = 154 bits (170), Expect = 1e-32 Identities = 157/202 (78%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || || || | |||||| || || |||||||||||||| ||||| |||||||| Sbjct 2427702 GCCACCACGCAGGCGGAGCACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGA 2427643 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||| ||||| |||| |||||||||||||| ||||| ||||| ||||| ||||||| ||| Sbjct 2427642 GAGAGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAAATCAGACGCTGCTGGTCCGGGGG 2427583 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 || || |||||||||| || | || || | |||| | | |||||| || | ||| | Sbjct 2427582 AATGCCCTCCTTGTCC-TGGATCTTGGCCTTAACGTTTTCGATAGTGTCACTGGGCTCGA 2427524 Query 41814 CCTCCACCGTTATCGTTTTACC 41835 |||| | ||| || || || || Sbjct 2427523 CCTCGAGCGTGATGGTCTTGCC 2427502 Score = 149 bits (164), Expect = 6e-31 Identities = 155/201 (77%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | |||||| || || |||||||||||||| ||||| ||||||||| Sbjct 1682153 CCACCACGCAGGCGGAGCACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 1682212 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| |||| |||||||||||||| || || ||||| ||||| ||||||| ||| Sbjct 1682213 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGG 1682272 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| || | || || | |||| | | |||||| || | ||| || Sbjct 1682273 ATGCCCTCCTTGTCC-TGGATCTTGGCCTTAACGTTTTCGATAGTGTCACTGGGCTCGAC 1682331 Query 41815 CTCCACCGTTATCGTTTTACC 41835 ||| | ||| || || || || Sbjct 1682332 CTCGAGCGTGATGGTCTTGCC 1682352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462301208839600