Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bovis_20[genbank_20GCA_5F000165395.1_202007-09-06] 14 sequences; 8,179,706 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq10 107 1e-18 seq11 93.3 3e-14 >seq10 Length=1797577 Score = 107 bits (118), Expect = 1e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34181 ACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCC 34240 || ||||| | |||||| || ||||| ||||||||||| |||| | ||| | || ||| Sbjct 1343900 ACTAGGTGGAGAGTACTCTCCTTCTGGATGTTGTAGTCAGACAACGTACGACCATCTTCC 1343959 Query 34241 AACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCT 34300 |||||||| || || || || | ||||||||||| ||| | | ||||||||| Sbjct 1343960 AACTGCTTACCAGCAAAGATCAAACGCTGCTGGTCTGGGGGAATACCCTCCTTGTCCTGG 1344019 Query 34301 ATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTG 34360 |||||| ||| | | | || | ||| | | || || |||| |||||||| || Sbjct 1344020 ATCTTTGCCTTGACGTTTTCGATAGTGTCGCTGGGCTCCACCTCCAAGGTGATGGTCTTA 1344079 Query 34361 CCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || || ||||| || ||||| || ||||| Sbjct 1344080 CCAGTAAGAGTCTTGACAAAAATTTGCAT 1344108 Score = 107 bits (118), Expect = 1e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34181 ACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCC 34240 || ||||| | |||||| || ||||| ||||||||||| |||| | ||| | || ||| Sbjct 1344128 ACTAGGTGGAGAGTACTCTCCTTCTGGATGTTGTAGTCAGACAACGTACGACCATCTTCC 1344187 Query 34241 AACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCT 34300 |||||||| || || || || | ||||||||||| ||| | | ||||||||| Sbjct 1344188 AACTGCTTACCAGCAAAGATCAAACGCTGCTGGTCTGGGGGAATACCCTCCTTGTCCTGG 1344247 Query 34301 ATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTG 34360 |||||| ||| | | | || | ||| | | || || |||| |||||||| || Sbjct 1344248 ATCTTTGCCTTGACGTTTTCGATAGTGTCGCTGGGCTCCACCTCCAAGGTGATGGTCTTA 1344307 Query 34361 CCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || || ||||| || ||||| || ||||| Sbjct 1344308 CCAGTAAGAGTCTTGACAAAAATTTGCAT 1344336 >seq11 Length=827912 Score = 93.3 bits (102), Expect = 3e-14 Identities = 140/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 34192 AGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCC 34251 |||||| || ||||| ||||||||||| |||| | ||| | || ||||||||||| || Sbjct 715804 AGTACTCTCCTTCTGGATGTTGTAGTCAGACAACGTACGACCATCTTCCAACTGCTTACC 715863 Query 34252 TGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTT 34311 || || || | ||||||||||| ||| | | ||||||||| ||||| ||| Sbjct 715864 AGCAAAGATCAAACGCTGCTGGTCTGGGGGAATACCCTCCTTGTCCTGGATCTTGGCCTT 715923 Query 34312 TAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGT 34371 | || | || | || | | || || |||| || |||||||| || || | || Sbjct 715924 GACATTTTCGATAGTGTCACTGGGCTCAACCTCCAATGTAATGGTTTTACCCGTTAAGGT 715983 Query 34372 TTTCACAAAGATCTGCATC 34390 ||| || || ||||||||| Sbjct 715984 TTTAACGAAAATCTGCATC 716002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323071944875840