Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bovis_20[genbank_20GCA_5F000165395.1_202007-09-06] 14 sequences; 8,179,706 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq10 107 2e-18 >seq10 Length=1797577 Score = 107 bits (118), Expect = 2e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 139547 AAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTC 139606 ||||||||||||| ||| | ||| ||| || || ||||| || || || || | Sbjct 1344119 AAACGCAAAACTAGGTGGAGAGTACTCTCCTTCTGGATGTTGTAGTCAGACAACGTACGA 1344178 Query 139607 GAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCT 139666 ||||| | ||| ||||||||| |||||| ||| ||||| || || || || || || Sbjct 1344179 CCATCTTCCAACTGCTTACCAGCAAAGATCAAACGCTGCTGGTCTGGGGGAATACCCTCC 1344238 Query 139667 TTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTC 139726 ||||| ||| ||| || | | ||| | |||||| ||||||||||||| | ||| Sbjct 1344239 TTGTCCTGGATCTTTGCCTTGACGTTTTCGATAGTGTCGCTGGGCTCCACCTCCAAGGTG 1344298 Query 139727 ACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 | ||||| || || | || || || || ||||||||| Sbjct 1344299 ATGGTCTTACCAGTAAGAGTCTTGACAAAAATTTGCATA 1344337 Score = 102 bits (112), Expect = 8e-17 Identities = 154/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 139547 AAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTC 139606 ||||| ||||||| ||| | ||| ||| || || ||||| || || || || | Sbjct 1343891 AAACGTAAAACTAGGTGGAGAGTACTCTCCTTCTGGATGTTGTAGTCAGACAACGTACGA 1343950 Query 139607 GAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCT 139666 ||||| | ||| ||||||||| |||||| ||| ||||| || || || || || || Sbjct 1343951 CCATCTTCCAACTGCTTACCAGCAAAGATCAAACGCTGCTGGTCTGGGGGAATACCCTCC 1344010 Query 139667 TTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTC 139726 ||||| ||| ||| || | | ||| | |||||| ||||||||||||| | ||| Sbjct 1344011 TTGTCCTGGATCTTTGCCTTGACGTTTTCGATAGTGTCGCTGGGCTCCACCTCCAAGGTG 1344070 Query 139727 ACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 | ||||| || || | || || || || ||||||||| Sbjct 1344071 ATGGTCTTACCAGTAAGAGTCTTGACAAAAATTTGCATA 1344109 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 139547 AAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTC 139606 ||||||||||||| ||| | || ||| || || ||||| || || || || | Sbjct 1344347 AAACGCAAAACTAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGACAACGTACGA 1344406 Query 139607 GAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCT 139666 ||||| | ||| ||||||||| |||||| ||| ||||| || || || || || || Sbjct 1344407 CCATCTTCCAACTGCTTACCAGCAAAGATCAAACGCTGCTGGTCTGGGGGAATACCCTCC 1344466 Query 139667 TTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTC 139726 ||||| ||| ||| || | | ||| | |||||| ||||||||||||| | ||| Sbjct 1344467 TTGTCCTGGATCTTTGCCTTGACGTTTTCGATAGTGTCGCTGGGCTCCACCTCCAAGGTG 1344526 Query 139727 ACCGTCTTGCC 139737 | ||||| || Sbjct 1344527 ATGGTCTTACC 1344537 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063913188800