Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bovis_20[genbank_20GCA_5F000165395.1_202007-09-06] 14 sequences; 8,179,706 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq10 93.3 6e-14 >seq10 Length=1797577 Score = 93.3 bits (102), Expect = 6e-14 Identities = 111/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 42059 ATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAAC 42118 || |||||| | ||||| ||| || || || || || ||| | ||||||| ||| Sbjct 1461230 ATGAAACATCCAAAATCTGCGTGTAGTCCTTCGTCCCTTGCAATAAGTTCGTTGCTAAAG 1461289 Query 42119 GTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAA 42178 || | || ||||| || ||||| ||||||||||||||||||| ||| ||||||| Sbjct 1461290 GTCAACCCTGGCATGAGACCACGTTTTTTAAGCCAAAATATAGCACAAAAACTTCCAGAA 1461349 Query 42179 AAGAAGATTCCTTCTACTGCCGCAAAGGCAA 42209 || || || ||||| ||||| ||| | |||| Sbjct 1461350 AAAAATATGCCTTCAACTGCTGCATATGCAA 1461380 Score = 89.7 bits (98), Expect = 7e-13 Identities = 112/154 (73%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 42473 CTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAATTTA 42532 ||||| ||||| || || | ||||| ||| ||||||| | ||| || || | || Sbjct 1461737 CTGGCGGCAAAGAAGGCTAGTACATTTTTAATAAAATGATGTTCCCCCTCGGTAAGAGTA 1461796 Query 42533 TTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCT 42592 |||||| |||| ||| |||| ||||| ||||||| ||||| |||||||||| | Sbjct 1461797 CCCCAATCTTTGAGATCAGACGATAAATCTATTTCTTCTGAAGTCCAGAATGATGCTTGT 1461856 Query 42593 GCCTTTTTATACATATTCCAGATATCATGATATT 42626 |||||||||||| | ||| | |||| | |||| Sbjct 1461857 GCCTTTTTATACCATTCCCAAAAATCAGGGTATT 1461890 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671139082550640