Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bovis_20[genbank_20GCA_5F000165395.1_202007-09-06] 14 sequences; 8,179,706 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq10 84.2 1e-11 >seq10 Length=1797577 Score = 84.2 bits (92), Expect = 1e-11 Identities = 158/231 (68%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| || || || ||||| || | || | || ||| || || || ||||| ||||| Sbjct 1344109 ACCACCCCTCAAACGCAAAACTAGGTGGAGAGTACTCTCCTTCTGGATGTTGTAGTCAGA 1344168 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 ||| | | || ||||| ||||| ||| ||| || ||||| |||||||| | ||| Sbjct 1344169 CAACGTACGACCATCTTCCAACTGCTTACCAGCAAAGATCAAACGCTGCTGGTCTGGGGG 1344228 Query 33262 TATGCCTTCTTTTTCGCTAATC---GCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTG 33318 || || || || || ||| |||| | || ||| || |||||| |||| | Sbjct 1344229 AATACCCTCCTTGTCCTGGATCTTTGCCT---TGACGTTTTCGATAGTGTCGCTGGGCTC 1344285 Query 33319 AACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || |||| || || || || || |||||||| || || ||||||||||| Sbjct 1344286 CACCTCCAAGGTGATGGTCTTACCAGTAAGAGTCTTGACAAAAATTTGCAT 1344336 Score = 82.4 bits (90), Expect = 5e-11 Identities = 136/195 (70%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 33178 CTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAA 33237 ||| || || || ||||| |||||||| | | || ||||| ||||| ||| ||| Sbjct 1343917 CTCCTTCTGGATGTTGTAGTCAGACAACGTACGACCATCTTCCAACTGCTTACCAGCAAA 1343976 Query 33238 TATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTAATC---GCCTGTTTTAC 33294 || ||||| |||||||| | ||| || || || || || ||| |||| | || Sbjct 1343977 GATCAAACGCTGCTGGTCTGGGGGAATACCCTCCTTGTCCTGGATCTTTGCCT---TGAC 1344033 Query 33295 TGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTT 33354 ||| || |||||| |||| | || |||| || || || || || |||||||| || Sbjct 1344034 GTTTTCGATAGTGTCGCTGGGCTCCACCTCCAAGGTGATGGTCTTACCAGTAAGAGTCTT 1344093 Query 33355 TACGAAAATTTGCAT 33369 || ||||||||||| Sbjct 1344094 GACAAAAATTTGCAT 1344108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318777545608572