Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bovis_20[genbank_20GCA_5F000165395.1_202007-09-06] 14 sequences; 8,179,706 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq2 113 6e-20 seq10 96.9 4e-15 >seq2 Length=821816 Score = 113 bits (124), Expect = 6e-20 Identities = 445/692 (64%), Gaps = 6/692 (1%) Strand=Plus/Plus Query 63138 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 63197 |||||||| || |||||||||| | || ||| | || ||||| |||||||||| | | Sbjct 732627 TCGAACTCATCACCCCAAACATCATATAAGCCACGGCACTCATCGGGACACATCAGTGTC 732686 Query 63198 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 63256 || || |||| || || || |||||||| || ||||||||||| | ||| ||| || Sbjct 732687 CAGTCACCGTTGGACTCAACACGCTTCATAAACAGGTCAGGAATCCACAAAGC-ATAGAA 732745 Query 63257 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63316 | ||| | || | | |||||| || ||||| | || || || |||| Sbjct 732746 CAAATCACGGGCGCGAGCTTCCTCAGCACCGTGGTTCTTGCGCAAGTCCAGAAAGTCCAT 732805 Query 63317 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63376 ||| |||| |||||| || || | ||| ||||| | || || ||| || || Sbjct 732806 AATGTCAGCATGCCATGGCTCAAGGTAGATGGCAAAGGAACCTTTACGCTTGCCACCACC 732865 Query 63377 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGA 63436 ||| || | || | ||| ||| || | | | |||||||| | | |||||| Sbjct 732866 CTGGTCAACATAACGAGCAGTGGAGTTGAATATACGTAACATTGGGACTAGACCGTTGCT 732925 Query 63437 TATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACC 63496 | || |||||||| || || |||||||| | || || | | || || Sbjct 732926 CTTGCCGTTGGTACCACGAATGTAAGCGCCACTGGCCCTGATCTTGTGACAAGCAAGGCC 732985 Query 63497 TATTCCCCCTGC-CATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCT 63555 || || || || || || | || || || || | | || || || | ||||| Sbjct 732986 AATACCACCAGCACACTTGCTA-ATGAAGGCACACTGGGTCAAAGTCTCGAAAATACCAG 733044 Query 63556 CTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTC 63615 | | | ||||| |||||| |||| ||||| || ||||| || | ||| ||| | Sbjct 733045 CCAAGGAGTCATCCTTCATGTCCAGTAAGAAACAACTGGACATCTGAGGTCGAGGAGTAC 733104 Query 63616 CCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACG 63675 | | || ||||| |||| || || || || | || | | | | | ||| | Sbjct 733105 CGGAGAAGAACAAGGTGGGAGTCGCATGAGTGAAGTACTTCTGACTCATCAAGTGGTAGG 733164 Query 63676 TCTCAATAGCTGAGTCTATATC-CCATTGATGAATTCCTACTGCGACACGCATTAACATG 63734 ||| ||| | || || || ||| || || || || | | ||||||||||||||| Sbjct 733165 TCTGAATGGTACGCTCAATGTCACCAGTG-TGGATACCAGCAGATACACGCATTAACATG 733223 Query 63735 TGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTT 63794 || ||||| | || || ||||||| ||||| | || ||||| |||||||| Sbjct 733224 TGTTGAGGACGCTCCACTATCTTGTCATTTATACGAAGTAAATAGGAACGCTCCAAAGTC 733283 Query 63795 TTAAAACCAAAATAGTTGTATGAAAAGTCTCG 63826 || |||||||| |||| ||| |||||| || Sbjct 733284 TTCAAACCAAAGTAGTCGTACTGAAAGTCACG 733315 >seq10 Length=1797577 Score = 96.9 bits (106), Expect = 4e-15 Identities = 112/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 33298 ATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAAC 33357 || |||||| | ||||| ||| || || ||||| || ||| ||||||||| ||| Sbjct 1461230 ATGAAACATCCAAAATCTGCGTGTAGTCCTTCGTCCCTTGCAATAAGTTCGTTGCTAAAG 1461289 Query 33358 GTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAA 33417 || | || ||||| || ||||| ||||||||||||||||| | | || ||||||| Sbjct 1461290 GTCAACCCTGGCATGAGACCACGTTTTTTAAGCCAAAATATAGCACAAAAACTTCCAGAA 1461349 Query 33418 AAGAAGATTCCTTCTACTGCAGCAAAGGCAA 33448 || || || ||||| ||||| ||| | |||| Sbjct 1461350 AAAAATATGCCTTCAACTGCTGCATATGCAA 1461380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622947090984240