Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bovis_20[genbank_20GCA_5F000165395.1_202007-09-06] 14 sequences; 8,179,706 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq2 217 4e-51 >seq2 Length=821816 Score = 217 bits (240), Expect = 4e-51 Identities = 716/1099 (65%), Gaps = 28/1099 (3%) Strand=Plus/Minus Query 363400 AAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGAACGCCCGCAG 363459 ||||| ||||| ||||| || |||||| |||| | || || || || || || Sbjct 733285 AAGACTTTGGAGCGTTCCTATTTACTTCGTATAAATGACAAGATAGTGGAGCGTCCTCAA 733226 Query 363460 CATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATG---TTGATGCCGCGATT 363516 || |||||||||||||| || ||||||||| | | | || |||| | ||| Sbjct 733225 CACATGTTAATGCGTGTATCTGCTGGTATCCA---CACTGGTGACATTGAGCGTACCATT 733169 Query 363517 GAAACATATAAGCTTCTAAGTGCTCGTGTA-TTCACGCACGCCACGCCAACAATGTACAA 363575 | || || | | | ||| | ||| ||||| || || || || || ||| | Sbjct 733168 CAGACCTACCACTTGATGAGT-CAGAAGTACTTCACTCATGCGACTCCCACCTTGTTCTT 733110 Query 363576 TGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTT-CTAAAAATGAAGGACGATT 363634 | || |||| | || |||||||| ||| |||||| || | |||||||| || | Sbjct 733109 CTCCGGTACTCCTCGACCTCAGATGTCCAGTTG-TTTCTTACTGGACATGAAGGATGACT 733051 Query 363635 CCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGGCG 363694 || | | ||||| || || || | | | ||||| | ||| |||| ||| || | Sbjct 733050 CCTTGGCTGGTATTTTCGAGACTTTGACCCAGTGTGCCTTCATTAGCAAGTGTGCTGGTG 732991 Query 363695 GAATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAG-TTACATTCGCGGCACAGGG 363753 | ||||| | | ||||| | | || ||| | ||||||||| || || Sbjct 732990 GTATTGGCCTTGCTTGTCACAAGATCAGGGC-CAGTGGCGCTTACATTCGTGGTACCAAC 732932 Query 363754 GGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTC 363813 || | || || || || || ||| | ||| | || || ||||| | || || Sbjct 732931 GGCAAGAGCAACGGTCTAGTCCCAATGTTACGTATATTCAACTCCACTGCTCGTTATGTT 732872 Query 363814 GACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCC 363873 ||||||||||| || ||||| ||||| | ||||| || || || ||||| ||||| Sbjct 732871 GACCAGGGTGGTGGCAAGCGTAAAGGTTCCTTTGCCATCTACCTTGAGCCATGGCATGCT 732812 Query 363874 GATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGT 363933 || ||| | || ||||| || | || || ||| || |||||| || || ||| Sbjct 732811 GACATTATGGACTTTCTGGACTTGCGCAAGAACCACGGTGCTGAGGAAGCTCGCGCCCGT 732752 Query 363934 GATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCA---GGT 363990 ||| |||||||||| | ||| || |||||| ||||||||||| || ||| | ||| Sbjct 732751 GATTTGTTCTATGCTTTGTGGATTCCTGACCTGTTTATGAAGCGTGTTGAGTCCAACGGT 732692 Query 363991 AAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGAC 364050 | ||| |||| | || || | || || | || | | ||||| |||||||| Sbjct 732691 GAC---TGGACACTGATGTGTCCCGATGAGTGCCGTGGCTTATATGATGTTTGGGGTGAT 732635 Query 364051 GACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAATTCCC 364110 || | | || |||||| || || || |||||| | ||||||||| || || Sbjct 732634 GAGTTCGAGGCCCTATACACCAAATACGAGATGGAGGGTCTTGGTCGTAAGACTATCCCA 732575 Query 364111 GCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATG 364170 ||||||| || ||||||||||| || | ||||| ||||| || | || | |||| Sbjct 732574 GCACAGACCCTGTGGTTTGCCATATTGCAAAGTCAGATAGAGACTGGCAACCCGTTTATG 732515 Query 364171 TTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG 364230 | || || ||| | ||||| |||||| ||||||||| | || ||||| ||| | Sbjct 732514 CTCTATAAGGATGCTTGCAATGCCAAGTCGAACCAGCAGAATCTGGGTACTATTAAATCC 732455 Query 364231 AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAAC 364290 ||||| ||| ||||||| || | ||||| ||||||| ||| ||| ||||||||| Sbjct 732454 TCTAACCTGTGTTGCGAGATTGTTCAGTACACATCTCCCGAGGAGGTTGCTGTATGTAAC 732395 Query 364291 CTTGCGTCGATCGCGCTTCCGGCGTTTGT--AAAAG----ATGGTACTTTTGACCACCAG 364344 | || || || || ||||| || ||| | ||| | || | ||| | || Sbjct 732394 TTGGCATCAATTGCACTTCCCATGTATGTGGACAAGGAGAACAAGACCTACGACTTCAAG 732335 Query 364345 CATCTTTATGACGT--AACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGACAAGA 364402 | || || ||||| | | | || ||| | ||| || ||||||| || || | Sbjct 732334 AAGCTGTACGACGTTGCTCGTGTGAT--TACCTACAACCTGAACAAGGTCATTGATCGTA 732277 Query 364403 ATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTGGTCTTG 364462 | || || || ||||||| ||| || || ||| || || | || |||||| | | Sbjct 732276 ACTACTACCCCGTTCCTGAGGCCAAGGTATCAAATCACCGCCACAGGCCCATTGGTGTCG 732217 Query 364463 GTGTACAGGGCCTCGCTGA 364481 | || ||||| |||||||| Sbjct 732216 GCGTTCAGGGTCTCGCTGA 732198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303353366210948