Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bovis_20[genbank_20GCA_5F000165395.1_202007-09-06] 14 sequences; 8,179,706 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq10 87.8 1e-12 >seq10 Length=1797577 Score = 87.8 bits (96), Expect = 1e-12 Identities = 137/194 (71%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 16744 CTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATA 16803 |||||| || ||||||||||| | || || | || ||||| || || || ||| | Sbjct 1343917 CTCCTTCTGGATGTTGTAGTCAGACAACGTACGACCATCTTCCAACTGCTTACCAGCAAA 1343976 Query 16804 AATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACC 16861 || | ||||| ||||| || | ||||| ||||| || ||||| ||| || Sbjct 1343977 GATCAAACGCTGCTGGTCTGGGGGAATACCCTCCTTGTCCTGGATCTTTGC--CTTGACG 1344034 Query 16862 TGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTG 16921 | | | |||||||| ||||||| |||| ||||||||| || || || || || ||| Sbjct 1344035 TTTTCGATAGTGTCGCTGGGCTCCACCTCCAAGGTGATGGTCTTACCAGTAAGAGTCTTG 1344094 Query 16922 ACAAAAATCTGCAT 16935 |||||||| ||||| Sbjct 1344095 ACAAAAATTTGCAT 1344108 Score = 87.8 bits (96), Expect = 1e-12 Identities = 137/194 (71%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 16744 CTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATA 16803 |||||| || ||||||||||| | || || | || ||||| || || || ||| | Sbjct 1344145 CTCCTTCTGGATGTTGTAGTCAGACAACGTACGACCATCTTCCAACTGCTTACCAGCAAA 1344204 Query 16804 AATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACC 16861 || | ||||| ||||| || | ||||| ||||| || ||||| ||| || Sbjct 1344205 GATCAAACGCTGCTGGTCTGGGGGAATACCCTCCTTGTCCTGGATCTTTGC--CTTGACG 1344262 Query 16862 TGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTG 16921 | | | |||||||| ||||||| |||| ||||||||| || || || || || ||| Sbjct 1344263 TTTTCGATAGTGTCGCTGGGCTCCACCTCCAAGGTGATGGTCTTACCAGTAAGAGTCTTG 1344322 Query 16922 ACAAAAATCTGCAT 16935 |||||||| ||||| Sbjct 1344323 ACAAAAATTTGCAT 1344336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405087930881860