Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bovis_20[genbank_20GCA_5F000165395.1_202007-09-06] 14 sequences; 8,179,706 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq10 96.9 3e-15 seq11 91.5 1e-13 >seq10 Length=1797577 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| |||||| | || ||||| ||||||| | || |||||| | Sbjct 1344108 ATGCAAATTTTTGTCAAGACTCTTACTGGTAAGACCATCACCTTGGAGGTGGAGCCCAGC 1344049 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||||||||| | ||| ||| ||| ||||| || || ||||| || ||||| Sbjct 1344048 GACACTATCGAAAACGTCAAGGCAAAGATCCAGGACAAGGAGGGTATTCCCCCAGACCAG 1343989 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || ||||| || || || || ||||||| ||| || || || ||||| Sbjct 1343988 CAGCGTTTGATCTTTGCTGGTAAGCAGTTGGAAGATGGTCGTACGTTGTCTGACTACAAC 1343929 Query 25179 ATTCAAAAAGA 25189 || || || || Sbjct 1343928 ATCCAGAAGGA 1343918 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| |||||| | || ||||| ||||||| | || |||||| | Sbjct 1344336 ATGCAAATTTTTGTCAAGACTCTTACTGGTAAGACCATCACCTTGGAGGTGGAGCCCAGC 1344277 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||||||||| | ||| ||| ||| ||||| || || ||||| || ||||| Sbjct 1344276 GACACTATCGAAAACGTCAAGGCAAAGATCCAGGACAAGGAGGGTATTCCCCCAGACCAG 1344217 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || ||||| || || || || ||||||| ||| || || || ||||| Sbjct 1344216 CAGCGTTTGATCTTTGCTGGTAAGCAGTTGGAAGATGGTCGTACGTTGTCTGACTACAAC 1344157 Query 25179 ATTCAAAAAGA 25189 || || || || Sbjct 1344156 ATCCAGAAGGA 1344146 >seq11 Length=827912 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || || || || || |||||| |||| ||| | || || ||| | | Sbjct 716001 ATGCAGATTTTCGTTAAAACCTTAACGGGTAAAACCATTACATTGGAGGTTGAGCCCAGT 715942 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||||||||| | ||| || ||| ||||| || || ||||| || ||||| Sbjct 715941 GACACTATCGAAAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATTCCCCCAGACCAG 715882 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || ||||| || || || || ||||||| ||| || || || ||||| Sbjct 715881 CAGCGTTTGATCTTTGCTGGTAAGCAGTTGGAAGATGGTCGTACGTTGTCTGACTACAAC 715822 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTA 25211 || || || || || || |||||||| ||| Sbjct 715821 ATCCAGAAGGAGAGTACTCTCCATTTAGTTCTA 715789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327926063410