Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bovis_20[genbank_20GCA_5F000165395.1_202007-09-06] 14 sequences; 8,179,706 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq10 140 6e-28 >seq10 Length=1797577 Score = 140 bits (154), Expect = 6e-28 Identities = 162/216 (75%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 68247 CGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCA 68306 ||||| || | ||| || || ||| || |||||||| || || || | || | ||| Sbjct 1344122 CGCAAAACTAGGTGGAGAGTACTCTCCTTCTGGATGTTGTAGTCAGACAACGTACGACCA 1344181 Query 68307 TCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTG 68366 ||||| |||||||| || || || || | | || ||||| || ||||| || |||||| Sbjct 1344182 TCTTCCAACTGCTTACCAGCAAAGATCAAACGCTGCTGGTCTGGGGGAATACCCTCCTTG 1344241 Query 68367 TCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTACTTCCAAGGTGAT 68425 || || ||||||||||||||| ||||| ||||| ||| | || || ||||||||||| Sbjct 1344242 TCCTGGATCTTTGCCTTGACGTTTTCGATAGTGTC-GCTGGGCTCCACCTCCAAGGTGAT 1344300 Query 68426 GGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||| || || || || |||||||| || || ||||| Sbjct 1344301 GGTCTTACCAGTAAGAGTCTTGACAAAAATTTGCAT 1344336 Score = 134 bits (148), Expect = 3e-26 Identities = 161/216 (75%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 68247 CGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCA 68306 || || || | ||| || || ||| || |||||||| || || || | || | ||| Sbjct 1343894 CGTAAAACTAGGTGGAGAGTACTCTCCTTCTGGATGTTGTAGTCAGACAACGTACGACCA 1343953 Query 68307 TCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTG 68366 ||||| |||||||| || || || || | | || ||||| || ||||| || |||||| Sbjct 1343954 TCTTCCAACTGCTTACCAGCAAAGATCAAACGCTGCTGGTCTGGGGGAATACCCTCCTTG 1344013 Query 68367 TCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTACTTCCAAGGTGAT 68425 || || ||||||||||||||| ||||| ||||| ||| | || || ||||||||||| Sbjct 1344014 TCCTGGATCTTTGCCTTGACGTTTTCGATAGTGTC-GCTGGGCTCCACCTCCAAGGTGAT 1344072 Query 68426 GGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||| || || || || |||||||| || || ||||| Sbjct 1344073 GGTCTTACCAGTAAGAGTCTTGACAAAAATTTGCAT 1344108 Score = 122 bits (134), Expect = 2e-22 Identities = 142/189 (75%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 68247 CGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCA 68306 ||||| || | ||| || ||| ||| || |||||||| || || || | || | ||| Sbjct 1344350 CGCAAAACTAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGACAACGTACGACCA 1344409 Query 68307 TCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTG 68366 ||||| |||||||| || || || || | | || ||||| || ||||| || |||||| Sbjct 1344410 TCTTCCAACTGCTTACCAGCAAAGATCAAACGCTGCTGGTCTGGGGGAATACCCTCCTTG 1344469 Query 68367 TCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTACTTCCAAGGTGAT 68425 || || ||||||||||||||| ||||| ||||| ||| | || || ||||||||||| Sbjct 1344470 TCCTGGATCTTTGCCTTGACGTTTTCGATAGTGTC-GCTGGGCTCCACCTCCAAGGTGAT 1344528 Query 68426 GGTTTTTCC 68434 ||| || || Sbjct 1344529 GGTCTTACC 1344537 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921622238716080