Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bovis_20[genbank_20GCA_5F000165395.1_202007-09-06] 14 sequences; 8,179,706 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq10 114 3e-20 >seq10 Length=1797577 Score = 114 bits (126), Expect = 3e-20 Identities = 146/200 (73%), Gaps = 6/200 (3%) Strand=Plus/Plus Query 288277 GTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCT 288336 || || || || ||||| || ||||| | | ||| || || ||||| || || || || Sbjct 1343912 GTACTCTCCTTCTGGATGTTGTAGTCAGACAACGTACGACCATCTTCCAACTGCTTACCA 1343971 Query 288337 GCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCT 288393 || ||||||| |||||| || |||||| || || || || |||||||| || || Sbjct 1343972 GCAAAGATCAAACGCTGCTGG---TCTGGGGGAATACCCTCCTTGTCCTGGATCTTTGCC 1344028 Query 288394 TTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGA 288453 || |||||||| |||| ||||| | || || || | ||||| ||||| || || ||| Sbjct 1344029 TTGACGTTTTCGATAGTGTCGCTGGGCTCCACCTCCAAGGTGATGGTCTTACCAGTAAGA 1344088 Query 288454 GTCTTGACGAATATCTGCAT 288473 |||||||| || || ||||| Sbjct 1344089 GTCTTGACAAAAATTTGCAT 1344108 Score = 114 bits (126), Expect = 3e-20 Identities = 146/200 (73%), Gaps = 6/200 (3%) Strand=Plus/Plus Query 288277 GTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCT 288336 || || || || ||||| || ||||| | | ||| || || ||||| || || || || Sbjct 1344140 GTACTCTCCTTCTGGATGTTGTAGTCAGACAACGTACGACCATCTTCCAACTGCTTACCA 1344199 Query 288337 GCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCT 288393 || ||||||| |||||| || |||||| || || || || |||||||| || || Sbjct 1344200 GCAAAGATCAAACGCTGCTGG---TCTGGGGGAATACCCTCCTTGTCCTGGATCTTTGCC 1344256 Query 288394 TTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGA 288453 || |||||||| |||| ||||| | || || || | ||||| ||||| || || ||| Sbjct 1344257 TTGACGTTTTCGATAGTGTCGCTGGGCTCCACCTCCAAGGTGATGGTCTTACCAGTAAGA 1344316 Query 288454 GTCTTGACGAATATCTGCAT 288473 |||||||| || || ||||| Sbjct 1344317 GTCTTGACAAAAATTTGCAT 1344336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179654188399492