Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bovis_20[genbank_20GCA_5F000165395.1_202007-09-06] 14 sequences; 8,179,706 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq2 134 1e-26 >seq2 Length=821816 Score = 134 bits (148), Expect = 1e-26 Identities = 380/575 (66%), Gaps = 8/575 (1%) Strand=Plus/Minus Query 94060 GCCAGGGGTTCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTC 94119 ||||| || | ||||| || |||||||| |||| |||||| || ||||| ||| | Sbjct 732961 GCCAGTGGCGCTTACATTCGTGGTACCAACGGCAAGAGCAACGGTCTAGTCCCAATGTTA 732902 Query 94120 CGGGTCTTCAACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCT 94179 || | |||||| | | || || || || |||||||||||||| | | | || ||||| Sbjct 732901 CGTATATTCAACTCCACTGCTCGTTATGTTGACCAGGGTGGTGGCAAGCGTAAAGGTTCC 732842 Query 94180 TTCGCGGTCTATCTCGAGCCCTGGCACGCGGACGTGCAGG-CTTTCATCGACCTGCGAAA 94238 || || |||| || ||||| ||||| || ||| | || ||||| | ||| |||| || Sbjct 732841 TTTGCCATCTACCTTGAGCCATGGCATGCTGACATTATGGACTTTC-TGGACTTGCGCAA 732783 Query 94239 GAACCACGGCAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGA 94298 ||||||||| || | | ||| | || | ||||| ||| | ||| | || || Sbjct 732782 GAACCACGGTGCTGAGGAAGCTCGCGCCCGTGATTTGTTCTATGCTTTGTGGATTCCTGA 732723 Query 94299 CCTTTTTATGAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATG 94358 ||| |||||||| || || ||| ||| | ||||| || | |||||| |||| || Sbjct 732722 CCTGTTTATGAAGCGTGTTGAGTCCAACGGTGACTGGACACTGATGTGTCCCGATGAGTG 732663 Query 94359 TCCCGGACTGTCCGACGTTTGTG--GATCGCGTTTTGAAGACTTGTATGCTCGTTACGA- 94415 | || | | || ||||| | ||| | | || || | | | || | ||||| Sbjct 732662 CCGTGGCTTATATGATGTTTGGGGTGAT-GAG-TTCGAGGCCCTATACACCAAATACGAG 732605 Query 94416 ATCGCAGGGCAAGGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGA 94475 || | || | || | | ||| ||| || || |||||| | || || | Sbjct 732604 ATGGAGGGTCTTGGTC-GTAAGACTATCCCAGCACAGACCCTGTGGTTTGCCATATTGCA 732546 Query 94476 CGTACAGGTGGAGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTC 94535 ||| | ||||| || | || | || | | ||||| || ||| |||||||| Sbjct 732545 AAGTCAGATAGAGACTGGCAACCCGTTTATGCTCTATAAGGATGCTTGCAATGCCAAGTC 732486 Query 94536 CAACCAGCAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTA 94595 ||||||||| | || || || || ||| || ||||| ||||||||| |||| Sbjct 732485 GAACCAGCAGAATCTGGGTACTATTAAATCCTCTAACCTGTGTTGCGAGATTGTTCAGTA 732426 Query 94596 TACTTCTCCGGACGAGATTGCTGTGTGTAACCTGG 94630 || ||||| || ||| ||||||| |||||| ||| Sbjct 732425 CACATCTCCCGAGGAGGTTGCTGTATGTAACTTGG 732391 Score = 84.2 bits (92), Expect = 2e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 95073 CAAACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCA 95132 ||||||||| | ||| |||| | |||| |||||||| || || ||||| | || Sbjct 731957 CAAACACGGGTTACGCAACTCGCTATTCCTGGCGCCCATGCCAACAGCATCCACATCACA 731898 Query 95133 GATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGT 95192 ||| || |||||||||||||||||||| |||| |||| ||| | ||| || | || || Sbjct 731897 GATTCTGGGCAACAACGAGTCGTTCGAGCCCTACACCAGCAATATCTACTACCGCCGCGT 731838 Query 95193 GCTCGCCGGGGAATTC 95208 ||| || |||||| Sbjct 731837 GCTGAGTGGTGAATTC 731822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494723113423440