Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bovis_20[genbank_20GCA_5F000165395.1_202007-09-06] 14 sequences; 8,179,706 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq10 114 9e-21 seq11 107 1e-18 >seq10 Length=1797577 Score = 114 bits (126), Expect = 9e-21 Identities = 168/233 (72%), Gaps = 6/233 (3%) Strand=Plus/Plus Query 14948 TGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGC 15007 ||||||| | ||| | |||||||| || || ||| || || || |||||||| || Sbjct 1343880 TGCCACCCCTCAAACGTAAAACTAGGTGGAGAGTACTCTCCTTCTGGATGTTGTAGTCA- 1343938 Query 15008 TGAGAATTCTCG--CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTT 15065 || || || | ||||| || || || ||||| | ||||||||||| ||||| Sbjct 1343939 -GACAACGTACGACCATCTTCCAACTGCTTACCAGCAAAGATCAAACGCTGCTGGTCTGG 1343997 Query 15066 TGGAATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTT 15124 ||||| || |||||||| || ||||| || || |||| ||||| ||||| | Sbjct 1343998 GGGAATACCCTCCTTGTCCTGGATCTTTGC-CTTGACGTTTTCGATAGTGTCGCTGGGCT 1344056 Query 15125 CTACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 | || || ||||| ||||| ||||| || ||||| || ||||||||||||||| Sbjct 1344057 CCACCTCCAAGGTGATGGTCTTACCAGTAAGAGTCTTGACAAAAATTTGCATA 1344109 Score = 107 bits (118), Expect = 1e-18 Identities = 165/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| | ||| | ||||||| || || ||| || || || |||||||| || | Sbjct 1344110 CCACCCCTCAAACGCAAAACTAGGTGGAGAGTACTCTCCTTCTGGATGTTGTAGTCA--G 1344167 Query 15010 AGAATTCTCG--CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 | || || | ||||| || || || ||||| | ||||||||||| ||||| | Sbjct 1344168 ACAACGTACGACCATCTTCCAACTGCTTACCAGCAAAGATCAAACGCTGCTGGTCTGGGG 1344227 Query 15068 GAATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCT 15126 |||| || |||||||| || ||||| || || |||| ||||| ||||| || Sbjct 1344228 GAATACCCTCCTTGTCCTGGATCTTTGC-CTTGACGTTTTCGATAGTGTCGCTGGGCTCC 1344286 Query 15127 ACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || ||||| ||||| ||||| || ||||| || ||||||||||||||| Sbjct 1344287 ACCTCCAAGGTGATGGTCTTACCAGTAAGAGTCTTGACAAAAATTTGCATA 1344337 >seq11 Length=827912 Score = 107 bits (118), Expect = 1e-18 Identities = 164/232 (71%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| | ||| | || ||||||||| || ||| || || || |||||||| || | Sbjct 715775 CCACCCCTCAAACGTAGAACTAAATGGAGAGTACTCTCCTTCTGGATGTTGTAGTCA--G 715832 Query 15010 AGAATTCTCG--CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 | || || | ||||| || || || ||||| | ||||||||||| ||||| | Sbjct 715833 ACAACGTACGACCATCTTCCAACTGCTTACCAGCAAAGATCAAACGCTGCTGGTCTGGGG 715892 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 |||| || |||||||| || ||| || ||| |||| ||||| || || || | Sbjct 715893 GAATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTTTCGATAGTGTCACTGGGCTCAA 715952 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179 | || || |||||||||||||| || | ||||| || ||||| ||||| || Sbjct 715953 CCTCCAATGTAATGGTTTTACCCGTTAAGGTTTTAACGAAAATCTGCATCTT 716004 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357391939019990