Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bovis_20[genbank_20GCA_5F000165395.1_202007-09-06] 14 sequences; 8,179,706 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq9 116 1e-20 seq11 95.1 5e-14 >seq9 Length=2593320 Score = 116 bits (128), Expect = 1e-20 Identities = 239/353 (68%), Gaps = 3/353 (1%) Strand=Plus/Minus Query 451244 CCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATT 451303 || |||||||||||||| ||||| || | |||||||| |||| || || | || | Sbjct 2152766 CCAGAAGAAATTTCATCCATGGTGCTCATCAAAATGAAGGAAATTGCCGAGCTGTACCTG 2152707 Query 451304 GGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGG 451363 ||| | || | ||||| || || || || ||||| || ||||| || | || || Sbjct 2152706 GGTAAGACCGTAAAGGATGCCGTCATCACCGTACCCGCCTACTTCAACGACTCCCAGAGG 2152647 Query 451364 CAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAA 451423 || || || || || || || ||||||||| | || ||| | || || || || ||| Sbjct 2152646 CAGGCTACCAAGGACGCTGGTACCATTGCTGGTCTCAACGTTATGCGTATCATCAACGAA 2152587 Query 451424 CCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaT 451483 || || || || || | || || || | ||| || || | | | ||||| || || Sbjct 2152586 CCCACCGCTGCCGCCATTGCCTACGG-TTTGGACAA--GAAGGGATCTGAAGAGAAGAAC 2152530 Query 451484 ATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGAT 451543 | | | || ||| ||||||| || ||| ||| || | ||| | |||||||| Sbjct 2152529 GTACTCATCTTCGATCTTGGTGGTGGTACTTTCGATGTGTCAATCCTTACCATTGAAGAC 2152470 Query 451544 GGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGA 451596 || | || ||||| ||||| ||| |||||| || || || || |||||||| Sbjct 2152469 GGTATCTTCGAAGTCAAGGCCACCGCTGGTGACACCCACCTTGGTGGTGAAGA 2152417 >seq11 Length=827912 Score = 95.1 bits (104), Expect = 5e-14 Identities = 196/292 (67%), Gaps = 11/292 (4%) Strand=Plus/Minus Query 451312 AGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAAC 451371 ||| ||| | || || |||||||| || || |||||||| || |||| |||| || || Sbjct 777026 AGTAACTAAGGCTGTTATTACTGTGCCTGCATATTTCAACGACTCACAGAGGCAGGCTAC 776967 Query 451372 TAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGC 451431 || || || || | ||||||||||| | ||| | | |||||||| || || || || Sbjct 776966 CAAGGACGCTGGCAAAATTGCTGGTTTGGACGTTTTAAGGATTATTAACGAGCCGACTGC 776907 Query 451432 AGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACA-GAAGaaaaaaaTATTTTAG 451490 |||||| | || | || || | ||||| | || | ||| | ||| | Sbjct 776906 CGCTGCTTTGGCTTTCGGTCTTG----------AGAAAAATGACGGAAAGACTATCGCTG 776857 Query 451491 TATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTAT 451550 ||| |||||| ||||| || ||| ||| | ||| || | || | ||| || | Sbjct 776856 TATATGATTTAGGTGGTGGTACTTTTGACATTTCAATATTGGAGATCCTTGGTGGTGTTT 776797 Query 451551 TTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGA 451602 |||| || ||||| ||||| || ||||| ||| || ||||| || |||| Sbjct 776796 TTGAGGTTAAGGCTACCAACGGCAATACTTCTCTCGGTGGTGAGGACTTTGA 776745 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975718045605512