Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bovis_20[genbank_20GCA_5F000165395.1_202007-09-06] 14 sequences; 8,179,706 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq9 309 4e-79 >seq9 Length=2593320 Score = 309 bits (342), Expect = 4e-79 Identities = 958/1463 (65%), Gaps = 36/1463 (2%) Strand=Plus/Plus Query 6704 ATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTCGGTGCGGCT 6763 ||||| || ||||| | |||||| | || | ||||| || ||| | || || | | Sbjct 2151655 ATACCGTTGGCATCGATATCGAAAGTAACTTCGATTTGAGGCACACCACGTGGAGCTGGT 2151714 Query 6764 GGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTCTTACGTTCA 6823 | |||||| || | | || | || || || |||| ||| | | | | ||||||| Sbjct 2151715 GCAATACCGGTGAGGTGGAACTTTCCTAGCAAGTTGTTGTCCTTGGTCATAGCACGTTCA 2151774 Query 6824 CCTTCATAGACTTTAATTGTCACCGCA----GGTTGATTATCTTGTGCCGTTGAGAAGAT 6879 ||||| |||| | || ||| | ||||| || || | || || | |||||| Sbjct 2151775 CCTTCGAAGACCTGGATGAACACACCTTCCTGGTTG-TTCTCGT-TG--GTGGTGAAGAT 2151830 Query 6880 TTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACC 6939 || ||||| | || || || || || ||| || | | |||||| | |||||| Sbjct 2151831 CTGGGTCTTCTTGGTAGGGATTGTGGTGTTCCTCTTGATGAGCACGGTCATGACACCACC 2151890 Query 6940 CATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGA 6999 |||||||| || || || || || | || || | || | || || || | Sbjct 2151891 AGCGGTTTCGAGACCGAGGGAGAGTGGAGCGACATCGAGAAGAAGCAATTCCTGGA---- 2151946 Query 7000 TTCGTTCC---CT--TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACC 7054 || | || || ||||| | |||||||| || || || | || ||||| || || Sbjct 2151947 -TCTTGCCAGACTGGTCACCGGACAAGATGGCAGCCTGTACAGCGGCACCGTAGGCAACG 2152005 Query 7055 GCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCC--GATAACA 7112 || ||||||||||| || | | | ||||| ||||| || | ||| ||| | | Sbjct 2152006 GCTTCATCGGGGTTGATTGAGCGGCTTGGCTCTTTTCCGTTGAAGAACTCCTTGATGAGA 2152065 Query 7113 TTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCG 7172 | || || || ||||| || || || |||||||| | ||||| ||| | | |||| Sbjct 2152066 CTC--TGGATCTTGGGGATACGGGTGGAACCACCGACAAGAACGACTTCGTGGATTTTCC 2152123 Query 7173 ATTTATCGAT--CTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAA 7230 || |||| | || | || || || ||||| || || || | | | ||| Sbjct 2152124 TCTTGTCGAGACCACTGGAT-TCCAA-TGCCTTTTCCACTGGGATCAAAGTTCCCCTGAA 2152181 Query 7231 CAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCC 7290 | || ||||| |||||| ||||| |||||| | |||| || | | | |||| || Sbjct 2152182 CTTCTCACCACACATTTCCTCGAAACGAGCACGGCTGATGGTAGTGTTGTAGTCAATACC 2152241 Query 7291 GTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGC 7350 ||| | | || || | ||||||||| | || | | || | | ||||| || Sbjct 2152242 TTCGAAGAGGGAGTCGAGTTCAATGGTGGCCTGGGTAGAGCTGGAAAGCACACGCTTAGC 2152301 Query 7351 GCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGA-AATATCTTTCT 7409 |||||||| || | | ||||||||| ||||| ||| | | || |||||| Sbjct 2152302 ACGCTCACAGTGGGTCCTGAGACGACGAAGAGCACGTTTGTTGCTTGCCAAGTTCTTTCC 2152361 Query 7410 TATGTTTACGTTTA--AACTCTT-CAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTT 7466 |||| | | | || || || | | ||| || ||| ||||| |||| Sbjct 2152362 GTTGTTGATCCTCATGAAGTCACGCACACA-GTGCTCAACGAGCAAGTTGTCGAAGTCTT 2152420 Query 7467 CACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGT 7526 ||||||| | ||| || || || ||||| || |||||||| |||||||| |||||||| Sbjct 2152421 CACCACCAAGGTGGGTGTCACCAGCGGTGGCCTTGACTTCGAAGATACCGTCTTCAATGG 2152480 Query 7527 TTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGT 7586 | | | || ||||| || ||||||||||| || || || |||||||||||| | || | Sbjct 2152481 TAAGGATTGACACATCGAAAGTACCACCACCAAGATCGAAGATGAGTACGTTCTTCTCTT 2152540 Query 7587 CGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATAC 7646 | | ||||| || | |||||| || || || || || || ||||| || || |||| Sbjct 2152541 CAGATCCCTTCTTGTCCAAACCGTAGGCAATGGCGGCAGCGGTGGGTTCGTTGATGATAC 2152600 Query 7647 GAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGT 7706 | | | ||| || |||||||| || | || || || || || || | || || |||| Sbjct 2152601 GCATAACGTTGAGACCAGCAATGGTACCAGCGTCCTTGGTAGCCTGCCTCTGGGAGTCGT 2152660 Query 7707 TAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCG 7766 | |||||||| || || || | ||| || ||| | || ||||||| || ||| || | Sbjct 2152661 TGAAGTAGGCGGGTACGGTGATGACGGCATCCTTTACGGTCTTACCCAGGTACAGCTCGG 2152720 Query 7767 CGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC-AGCCGCAAACTGTTTC 7825 | || || ||||||||| | || ||||| |||||||| ||||| | | || || ||| Sbjct 2152721 CAATTTCCTTCATTTTGATGAGCACCATGGATGAAATTTCTTCTGGGTGGAAGCT-CTTC 2152779 Query 7826 GTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTA 7885 ||| || | || || || || | |||||| | | ||||| | | ||||| Sbjct 2152780 TTTTGTCCCTGGAAGGTGACCTCGATGGTTGGTTTACCACCGACACCGTTGGTGACCTTG 2152839 Query 7886 TACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGA 7945 | | ||| | |||||| || || || || | ||| || | ||||| ||||| Sbjct 2152840 AATGGCCAGTGTTTCATGTCATCCTGTACGGTCTTGTCGTCGAATCTCCTTCCAATAAGC 2152899 Query 7946 CGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCC 8005 | || || || || || ||||| | ||||| ||| ||||||||| || || || Sbjct 2152900 CTTTTAGCGTCGAATACGGTGTTCTCAGGGTTACGTGCTTCTTGGTTCTTGGCGGCATCA 2152959 Query 8006 CCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCT 8065 |||||||||||||| | || || || || ||||| || || || |||| ||| || Sbjct 2152960 CCGATAAGACGTTC---GGTGTCGGTGAAGGCTACGTAGGAGGGTGTTGTTCTATTACCC 2153016 Query 8066 TGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTT 8125 ||||| || | ||| ||||| || || || | | || || || || || || || Sbjct 2153017 TGGTCATTAGGAATGATTTCGACATTGTTGTCCTTGTATACACCTACACAAGAGTAGGTA 2153076 Query 8126 GTTCCTAAATCAATACCGATTGC 8148 || || || ||||||||||| || Sbjct 2153077 GTACCCAAGTCAATACCGATAGC 2153099 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132688851760