Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bovis_20[genbank_20GCA_5F000165395.1_202007-09-06] 14 sequences; 8,179,706 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq2 183 4e-41 >seq2 Length=821816 Score = 183 bits (202), Expect = 4e-41 Identities = 841/1310 (64%), Gaps = 48/1310 (4%) Strand=Plus/Minus Query 111705 TTCATCCACGCAACACCAACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGT 111764 |||| || || || || ||| | ||| | | ||||| || |||| || ||||||||| Sbjct 733138 TTCACTCATGCGACTCCCACCTTGTTCTTCTCCGGTACTCCTCGACCTCAGATGTCCAGT 733079 Query 111765 TGTTTCCTTATTGCAAAC-AAGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGA 111823 |||||| ||| || | | ||||| || || | ||| |||| || ||| | || | Sbjct 733078 TGTTTC-TTACTGGACATGAAGGATGACTCCTTGGCTGGTATTTTCGAGACTTTGACCCA 733020 Query 111824 ATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCGGGAT-GCACATC-CATGATGTCAGA 111881 |||||| || ||||| ||||||||||| || | || || || ||| ||| Sbjct 733019 GTGTGCCTTCATTAGCAAGTGTGCTGGTGGTATTGGCCTTGCTTGTCACAAGAT--CAGG 732962 Query 111882 GCCAACAAGTCTCGTATTAGAGGTACAAATGGTCA-ATCAGATGGTATTATTCCAATGCT 111940 |||| || ||| | ||||| || || | | || | ||| | | |||||| | Sbjct 732961 GCCAGTGGCGCTTACATTCGTGGTACCAACGGCAAGAGCA-ACGGTCTAGTCCCAATGTT 732903 Query 111941 TCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGGGCGT---CGCAAGGGATC 111997 || |||| ||| |||| || || ||||| |||| | ||| | || || || || Sbjct 732902 ACGTATATTCAACTCCACTGCTCGTTATGTTGACCAGGGTGGTGGCAAGCGTAAAGGTTC 732843 Query 111998 TATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCT 112057 | || |||| |||||||||||||| || || || ||||| || || || ||||| Sbjct 732842 CTTTGCCATCTACCTTGAGCCATGGCATGCTGACATTATGGACTTTCTGGACTTGCGCAA 732783 Query 112058 CAACCAAGGTGATGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGA 112117 ||||| |||| |||||| || || ||| ||| | |||| ||| | |||||||| || Sbjct 732782 GAACCACGGTGCTGAGGAAGCTCGCGCCCGTGATTTGTTCTATGCTTTGTGGATTCCTGA 732723 Query 112118 TCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGC 112177 || || |||||| | |||||| | || | ||| | || | ||||| || || Sbjct 732722 CCTGTTTATGAAGCGTGTTGAGTCCAACGGTGACTGGACACTGATGTGTCCCGATGAGTG 732663 Query 112178 ACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGA 112237 | || | | |||| |||||| ||||| || ||||| ||||| || |||||| Sbjct 732662 CCGTGGCTTATATGATGTTTGGGGTGATGAGTTCGAGGCCCTATACACCAAATACGAGAT 732603 Query 112238 AGAAAGTC--GGGCGACTGCGACGGTGCCAGCTGCCGA-TGTGTGGAAAGC--TATTCTC 112292 || ||| || || | ||| | ||||| | || ||||| || |||| Sbjct 732602 GGAGGGTCTTGGTCG--TAAGACTATCCCAGC-ACAGACCCTGTGGTTTGCCATATTGCA 732546 Query 112293 AAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAG 112352 ||| ||| | |||||||| | || | |||||| || || || || || || ||| Sbjct 732545 AAG--TCAGATAGAGACTGGCAACCCGTTTATGCTCTATAAGGATGCTTGCAATGCCAAG 732488 Query 112353 AGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAA 112412 || || ||||| ||||| || || || ||||| ||| || || | | Sbjct 732487 TCGAACCAGCAGAATCTGGGTACTATTAAATCCTCTAACCTGTGTTGCGAGATTGTTCAG 732428 Query 112413 TTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTAT 112472 | ||| || ||| ||||| |||||| | |||||||| || || |||| |||| Sbjct 732427 TACACATCTCCCGAGGAGGTTGCTGTATGTAACTTGGCATCAATTGCACTTCCCATGTAT 732368 Query 112473 GTGGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTC 112532 ||||| |||| ||||| | || | | || || |||| ||| | | Sbjct 732367 GTGGACAAGGAGAACAAGACCTACGACTTCAAGAAGCTGTACGACGTTGCTCGTGTGATT 732308 Query 112533 ACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGT---TGAGACTGCTCGT 112589 || | ||||| |||| || |||||| | || | |||||||| |||| || Sbjct 732307 ACCTACAACCTGAACAAGGTCATTGATCGTAACTACTACCCCGTTCCTGAG---GCCAAG 732251 Query 112590 AAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTC 112649 ||| ||| | ||| | || |||||| |||| || || |||||||| ||| ||| Sbjct 732250 GTATCAAATCACCGCCACAGGCCCATTGGTGTCGGCGTTCAGGGTCTCGCTGATACCTTC 732191 Query 112650 ATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTT 112709 || | || | ||||||| ||||| || || ||||| | || ||||||||| Sbjct 732190 ATGTTGATGCGTTATCCATTTGAGTCCGAGGAGGCTAAGGAGCTGAACCGTCGTATATTT 732131 Query 112710 GAGACAATGTATCACGCCGCTCT---TGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGT 112766 ||||| || || ||| | | ||| | | ||| |||| ||| ||||| Sbjct 732130 GAGACTATATACTACGGGTGTTTGGATGAATCAATTTC---ACTGGCTGAGAAGTATGGT 732074 Query 112767 CCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGG 112826 | || || | | || || ||||| || || || |||||| ||||| | ||| Sbjct 732073 ACTTACGAGAGTTACCCAGGGTCACCAGCGTCCCAGGGTAAGCTTCAGTTTGACCTTTGG 732014 Query 112827 G----AA--GGTGAGACCAAGCTTCACTACGACTGGGACGCTCTCAAGGAACGCAT---C 112877 | || | ||| | |||| | | |||||||| | |||||| | || || | Sbjct 732013 GGTGCAACTGTTGACAACAAGTT---ATGGGACTGGGATGGCCTCAAGCAGCGTATGGCC 731957 Query 112878 AAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCA 112937 || | | |||| | || ||| || || |||| || ||||||||||| ||||| || Sbjct 731956 AA--ACACGGGT-TACGCAACTCGCTATTCCTGGCGCCCATGCCAACAGCATCCACATCA 731900 Query 112938 CAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTA 112987 || || |||| || || || | || || |||||||| | || ||||| Sbjct 731899 CAGATTCTGGGCAACAACGAGTCGTTCGAGCCCTACACCAGCAATATCTA 731850 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620742291370080