Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bovis_20[genbank_20GCA_5F000165395.1_202007-09-06] 14 sequences; 8,179,706 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq2 228 1e-54 >seq2 Length=821816 Score = 228 bits (252), Expect = 1e-54 Identities = 1008/1566 (64%), Gaps = 60/1566 (4%) Strand=Plus/Plus Query 109506 CGACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACACTTTTG 109565 ||| || |||||||| ||||| |||||| || || ||||||||||| || | ||| || Sbjct 731603 CGATTGTGACTGATCAATGAAAATACCACGGTCCGCAGCCATGTCGATAATGCTCTTCTG 731662 Query 109566 GCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTT 109625 |||||||||| || |||||||| | | |||||| | | || || || | |||| Sbjct 731663 CTTAATTTCCCAAACGGTCTTGTAAAGGTCCTTGATGTGCTGAGGGATACCCTCAATGTG 731722 Query 109626 TTGAATAGAGCCACC---AGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAGACC 109682 ||| || || ||| ||| | | |||||||| | | ||| || || Sbjct 731723 ACGAAGCGACCCGTTGTAAGCAATCAACTTC---TCCTTCATAGCGTCATCCCAAAGGCC 731779 Query 109683 GACCTTTTTGAGATCGTCAACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGT 109742 | | | ||||| | | ||| ||||||||| | ||||||||| || Sbjct 731780 AAGGTCTACCAGATCACGCAGTAAATGAGGGTTGACCACAAAGAATTCACCACTCAGCAC 731839 Query 109743 GCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTG 109802 ||| ||| |||||| || | |||||||| ||||| |||| |||||||| || || || Sbjct 731840 GCGGCGGTAGTAGATATTGCTGGTGTAGGGCTCGAACGACTCGTTGTTGCCCAGAATCTG 731899 Query 109803 TGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTT 109862 || ||||| ||||| |||||||| |||| || || ||| || | |||| || || Sbjct 731900 TGATGTGGATGCTGTTGGCATGGGCGCCAGGAATAGCGAGTTGCGTA-ACCC---GTGTT 731955 Query 109863 TACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATT-TAGTCT-CAC---CA 109917 | || | | ||| | || ||| | | || ||| || | ||| || || Sbjct 731956 TGGCCATACGCTGCTTGAGGCC--ATCCCA--GTCCCATAACTTGTTGTCAACAGTTGCA 732011 Query 109918 TCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTAC 109977 |||| | || ||||| ||||| | || || || || | |||||||||| Sbjct 732012 CCCCAAAGGTCAAACTGAAGCTTACCCTGGGACGCTGGTGACCCTGGGTAACTCTCGTAA 732071 Query 109978 GACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCA 110037 | || | ||| |||| ||| | || | | | | || ||||||||| Sbjct 732072 GTACCATACTTCTCAGCCAGTGAAATTGATTCATCCAAACACCCGTAGTATATAGTCTCA 732131 Query 110038 AAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGAC-CACAAAGAAT 110096 || ||| || |||| || ||| || | || || ||| || || || | | Sbjct 732132 AATATACGACGGTTCAGCTCCTTAGCCTCCTCGGACTCAAATGGATAACGCATCAACA-T 732190 Query 110097 AAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCT--TCATGTTAGAG 110154 || ||| || ||||||||||| |||| ||||||||| | || | || | | | Sbjct 732191 GAAGGTATCAGCGAGACCCTGAACGCCGACACCAATGGGCCTGTGGCGGTGATTTGATAC 732250 Query 110155 CGTCGAG-CAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGT 110213 | | | ||| |||||||| |||| || || |||||| || || || | || Sbjct 732251 CTTGGCCTCAGGA---ACGGGGTAGTAGTTACGATCAATGACCTTGTTCAGGTTGTAGGT 732307 Query 110214 ---CACAGTCTTCGTG--ATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTA 110268 |||| || | | || | || || | | | ||| | || || ||||||| Sbjct 732308 AATCACA-----CGAGCAACGTCGTACAGCTTCTTGAAGTCGTAGGTCTTGTTCTCCTTG 732362 Query 110269 TTGACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCG 110328 | ||||| |||| || ||||| || || | || || |||| | ||| || Sbjct 732363 TCCACATACATGGGAAGTGCAATTGATGCCAAGTTACATACAGCAACCTCCTCGGGAGAT 732422 Query 110329 GTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGA 110388 ||||| | | ||| || ||||| ||| || ||||| ||||| |||| ||| Sbjct 732423 GTGTACTGAACAATCTCGCAACACAGGTTAGAGGATTTAATAGTACCCAGATTCTGCTGG 732482 Query 110389 TTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGT 110448 ||||| |||| ||||| ||||||||||||||||| | ||| | ||||| || |||| Sbjct 732483 TTCGACTTGGCATTGCAAGCATCCTTATAGAGCATAAACGGGTTGCCAGTCTCTATCTG- 732541 Query 110449 GACTTGAGAAT--GGCCTTCCATACA-TCGGCGGCGGGGACAGT--TGCGTTAGCGAGAC 110503 |||| ||| ||| ||| | || | | | |||| ||| | || | | |||| Sbjct 732542 -ACTTTGCAATATGGCAAACCACAGGGTCTGTG-CTGGGATAGTCTTACG--ACCAAGAC 732597 Query 110504 CTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGAC 110563 | ||| |||||| |||||||| | | |||| || || | || | |||||| | | | Sbjct 732598 CCTCCATCTCGTATTTGGTGTATAGGGCCTCGAACTCATCACCCCAAACATCATATA-AG 732656 Query 110564 CCTTCGC-CTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTC---CTCAACCCTCTTC 110619 || || || |||||||| | || | ||| | |||| | |||||| | |||| Sbjct 732657 CCACGGCACTCATCGGGACACATCAGTGTCCAGT---CACCGTTGGACTCAACACGCTTC 732713 Query 110620 ATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCA 110679 || ||||||||||||||||||| || |||| | |||||| ||||| || ||| || Sbjct 732714 ATAAACAGGTCAGGAATCCACAAAGCATAGAACAAATCACGGGCGCGAGCTTCCTCAGCA 732773 Query 110680 CCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAG 110739 || ||||| ||| | |||| ||||||||| || || | |||||||| || || ||| Sbjct 732774 CCGTGGTTCTTGCGCAAGTCCAGAAAGTCCATAATGTCAGCATGCCATGGCTCAAGGTAG 732833 Query 110740 ACAGCGATGGATCCCTTACG---ACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTG 110796 | || | ||| || ||||| | ||| |||||| |||||| || || |||| ||| Sbjct 732834 ATGGCAAAGGAACCTTTACGCTTGCCACCACCCTGGTCAACATAACGAGCAGTGGAGTTG 732893 Query 110797 AAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGAC 110856 || | | | ||| || | | || | | | || || ||||| | ||| | Sbjct 732894 AATATACGTAACATTGGGACTAGACCGTTGCTCTTGCCGTTGGTACCACGAATGTAAGCG 732953 Query 110857 TTATTGGCACGAATGTCGTGGATATGC-ATACCAATACCACCCGCCCACTTACTAATTTG 110915 | |||| | || | || || | || | ||||||||||| || ||||| ||||| Sbjct 732954 CCACTGGCCCTGATCTTGT-GACAAGCAAGGCCAATACCACCAGCACACTTGCTAATGAA 733012 Query 110916 TGCACACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAG 110975 ||||||| || | || | |||||||| | | || || |||| || | | || Sbjct 733013 GGCACACTGGGTCAAAGTCTCGAAAATACCAGCCAAGGAGTCATCCTTCATGTCCAGTAA 733072 Query 110976 AAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATG 111035 || ||| ||||||||||| ||||| || || | ||| | || || |||||||| Sbjct 733073 GAAACAACTGGACATCTGAGGTCGAGGAGTACCGGAGAAGAACAAGGTGGGAGTCGCATG 733132 Query 111036 AATGAA 111041 | |||| Sbjct 733133 AGTGAA 733138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975896929200