Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bovis_20[genbank_20GCA_5F000165395.1_202007-09-06] 14 sequences; 8,179,706 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq2 210 3e-49 seq9 122 1e-22 >seq2 Length=821816 Score = 210 bits (232), Expect = 3e-49 Identities = 900/1400 (64%), Gaps = 42/1400 (3%) Strand=Plus/Plus Query 105935 TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 105994 ||||| || | |||||||| || || | || || || |||| || |||| ||||| Sbjct 731850 TAGATATTGCTGGTGTAGGGCTCGAACGACTCGTTGTTGCCCAGAATCTGTGATGTGGAT 731909 Query 105995 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTG---ATGCGT 106051 ||||||||||| || |||| || || ||| || | |||| | | ||| || || Sbjct 731910 GCTGTTGGCATGGGCGCCAGGAATAGCGAGTTGCGTA-ACCCGTGT--TTGGCCATACGC 731966 Query 106052 TCCTTGAGAACATCCCAGTCGTAGTTGAGCTTGGTTTCACC--TT----CCCACATATCA 106105 | |||||| |||||||||| | | |||| | ||| | || |||| | ||| Sbjct 731967 TGCTTGAGGCCATCCCAGTCCCAT---AACTTGTTGTCAACAGTTGCACCCCAAAGGTCA 732023 Query 106106 AATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCT 106165 || |||||| || ||||||| || || || | |||| || | ||| | Sbjct 732024 AACTGAAGCTTACCCTGGGACGCTGGTGACCCTGGGTAACTCTCGTAAGTACCATACTTC 732083 Query 106166 TCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCA 106225 ||||||| | | | |||| | ||| || || || ||||| |||||| Sbjct 732084 TCAGCCAGTGAAATTGATTCATCCAAACACCCGTAGTATATAGTCTCAAATATACGACGG 732143 Query 106226 TTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCG 106285 |||| |||||| || || || || ||||||| || || ||| || || ||| ||| Sbjct 732144 TTCAGCTCCTTAGCCTCCTCGGACTCAAATGGATAACGCATCAACATGAAGGTATCAGCG 732203 Query 106286 AGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGA---CTTTCGCGCAGTC 106342 ||||| ||||| || | |||||| || ||||| || ||| || ||| | ||| Sbjct 732204 AGACCCTGAACGCCGACACCAATGGGCCTGTGGCGGTGATTTGATACCTTGGCCTCAGG- 732262 Query 106343 TCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTG 106402 |||||| || | || | |||||||| ||| || || | ||||| | | Sbjct 732263 --AACGGGGTAGTAGTTACGATCAATGACCTTGTTCAGGTTGTAGGTAATCACACGAGCA 732320 Query 106403 ATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGG 106462 | || | || || | | || | || |||| | | |||||| | ||||| Sbjct 732321 ACGTCGTACAGCTTCTTGAAGTCGTAGGTCTTGTTCTCCTTGTCCACATACATGGGAAGT 732380 Query 106463 GCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCT 106522 || ||||||||||| || || ||||| ||| || | |||||||| | ||| || Sbjct 732381 GCAATTGATGCCAAGTTACATACAGCAACCTCCTCGGGAGATGTGTACTGAACAATCTCG 732440 Query 106523 GTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCAC 106582 ||||| ||| || ||||| || |||| ||||| ||||| ||| ||||| Sbjct 732441 CAACACAGGTTAGAGGATTTAATAGTACCCAGATTCTGCTGGTTCGACTTGGCATTGCAA 732500 Query 106583 GCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTT--GAGAATTGCCT 106640 |||||||| |||||||| | || | || ||||| | | |||||| | || || Sbjct 732501 GCATCCTTATAGAGCATAAACGGGTTGCCAGTCTC--TATCTGACTTTGCAATATGGCAA 732558 Query 106641 TCCACA-CATCGGCGGCTGGTACAATGGCGTTGGCCC--GTCCCTCCGCCTCGTACTTTG 106697 ||||| || | ||||| | | | | | | || | |||||| |||||| || | Sbjct 732559 ACCACAGGGTCTG-TGCTGGGATA--GTCTTACGACCAAGACCCTCCATCTCGTATTTGG 732615 Query 106698 TGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGAC 106757 |||| ||||| || ||||| |||||| | || | | || | || || |||| Sbjct 732616 TGTATAGGGCCTCGAACTCATCACCCCAAACATCATATAAGCCACGGCACTCATCGGGAC 732675 Query 106758 AGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACA 106817 | | || | ||| | ||| |||||| |||||||| || ||||| |||||||||| Sbjct 732676 ACATCAGTGTCCAGTCACCGTTGGACTCAACACGCTTCATAAACAGGTCAGGAATCCACA 732735 Query 106818 GGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAA 106877 | | || | ||| | ||||| || || |||| ||||| || || || | Sbjct 732736 AAGCATAGAACAAATCACGGGCGCGAGCTTCCTCAGCACCGTGGTTCTTGCGCAAGTCCA 732795 Query 106878 GGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCG-- 106935 | || ||||| || || || |||||||||||||| |||| || | || || || || Sbjct 732796 GAAAGTCCATAATGTCAGCATGCCATGGCTCAAGGTAGATGGCAAAGGAACCTTTACGCT 732855 Query 106936 -ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAA 106994 | ||| | || | ||||| || || |||| ||| |||| || | |||||| | | Sbjct 732856 TGCCACCACCCTGGTCAACATAACGAGCAGTGGAGTTGAATATACGTAACATTGGGACTA 732915 Query 106995 TACCATCTGAT-TGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATG- 107052 ||| | || | | || || || || ||||| || | |||| || ||| || Sbjct 732916 GACCGT-TGCTCTTGCCGTTGGTACCACGAATGTAAGCGCCACTGGCCCT--GATCTTGT 732972 Query 107053 GATGTGC-ATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTC 107111 || || | |||||||| ||||| ||||| || ||||||| || | ||| Sbjct 732973 GACAAGCAAGGCCAATACCACCAGCACACTTGCTAATGAAGGCACACTGGGTCAAAGTCT 733032 Query 107112 CATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCG 107171 | | ||||| | ||||| ||||| || | | | ||| |||||||||||||| | Sbjct 733033 CGAAAATACCAGCCAAGGAGTCATCCTTCATGTCCAGTAAGAAACAACTGGACATCTGAG 733092 Query 107172 GTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGAC 107230 ||| || ||||| | ||| | ||| || || || ||| |||| ||| | || | Sbjct 733093 GTCGAGGAGTACCGGAGAAGAACAAGGTGGGAGTCGCATGAGTGAA-GTACTTCTGACTC 733151 Query 107231 ATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACA 107290 ||| || ||| |||| | | | |||||||| | |||||| || | ||| Sbjct 733152 ATCAAGTGGTAGGTCTGAATGGTACGCTCAATGTCACCAGTGTGGATACCAGCAGATACA 733211 Query 107291 CGCATAAACATGTATTGGGG 107310 ||||| ||||||| ||| || Sbjct 733212 CGCATTAACATGTGTTGAGG 733231 >seq9 Length=2593320 Score = 122 bits (134), Expect = 1e-22 Identities = 301/452 (67%), Gaps = 26/452 (6%) Strand=Plus/Minus Query 168272 TGGTACATAGCAACTGAATCCCGTACCGATACCTTCGGTTCCATTCACGAGAACCATTGG 168331 ||||| | || |||||||| ||||| || ||||| | |||||| || | ||||| || Sbjct 1028288 TGGTATCTGGCTGCTGAATCCTGTACCTATCCCTTCAGATCCATTGACCAATACCATGGG 1028229 Query 168332 TATGGTTGGCATGTAAAAGTCTGGTTCAATTGAGCGCCCATCATCATCCAAGTAGTTGAG 168391 ||| ||||| ||||| | ||||| || | |||| || |||| | ||| | || Sbjct 1028228 TATTGTTGGTATGTAGTACATCGGTTCTATGGTCTGCCCCTCTTCATTCTGGTACTCCAG 1028169 Query 168392 GATCGGGTCATCC-------CGAGGATCAAAGATCTTGCGAGCCTCTTTGGT-AAGTTTT 168443 ||| ||||| ||| ||||| || | || || ||| ||| || Sbjct 1028168 GATATTATCATCTTCTTCTACGAAAATCAAC---CTCGTGA-----TTGGGTTAAGCTTG 1028117 Query 168444 GTGAAAATGTACCTCGTCTG-AGAAGCATCCTTACCACCCATGAGACGCGTACCAAATTG 168502 ||||| ||||| | || ||| ||| ||||||||||||||| ||| ||||||| || Sbjct 1028116 GTGAAGATGTAACGCG-CTGCAGATGCATCCTTACCACCCTCCTTACGGCTACCAAACTG 1028058 Query 168503 ACCACACGGTTCAAGAAGGTTAATGTTGTTTGAACCCGTGTAGTCGTTTGCCAACTTAAC 168562 ||| || ||||| | | ||| || ||||| || || ||| | ||||| || | Sbjct 1028057 ACCGCATGGTTCCAACACGTTGATATTGTTGGACCCTACAAAGTTCTGTGCCATATTGAT 1027998 Query 168563 AATCGTGT----CCGCTAAGGATACTTCACCATGGTGGTACGCAGACTTGTCCGCGACAT 168618 ||| || | | || ||| |||| ||||||||||| ||||| | |||||||||| Sbjct 1027997 AATGGTTTGTTGCAGCGAAG----CTTCTCCATGGTGGTATGCAGAGTGTTCCGCGACAT 1027942 Query 168619 ATGCCGCCAGTTGTGCCACCTTCATTTCATCCTTGAGATTCTTATGGAAGCAAGCATACA 168678 | | | || ||||||||||| |||| || || || | | |||| | | | Sbjct 1027941 AACCTGTGAGCTGTGCCACCTTACATTCACCCACTAGGTTACGCTTCAGGCAACCGAAGA 1027882 Query 168679 TCACTTTCCTCTGTGAAGGCTTGAGACCATCC 168710 ||| ||||||||| ||||| ||||||| Sbjct 1027881 GCACCTTCCTCTGTCCTGGCTTCCAACCATCC 1027850 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980696753360