Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bovis_20[genbank_20GCA_5F000165395.1_202007-09-06] 14 sequences; 8,179,706 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq9 150 1e-30 >seq9 Length=2593320 Score = 150 bits (166), Expect = 1e-30 Identities = 398/598 (67%), Gaps = 11/598 (2%) Strand=Plus/Minus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 ||||| ||||| || || || || || || |||||| ||||| | | | || Sbjct 2153099 GCTATCGGTATTGACTTGGGTACTACCTACTCTTGTGTAGGTGTATACAAGGACAACAAT 2153040 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 || ||||| ||| | ||||| || ||||| ||||| || || || || || | ||||| Sbjct 2153039 GTCGAAATCATTCCTAATGACCAGGGTAATAGAACAACACCCTCCTACGTAGCCTTCACC 2152980 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171 || || |||| | | | |||||||| || || | |||| | |||| ||| || Sbjct 2152979 GACACCGAACGTCTTATCGGTGATGCCGCCAAGAACCAAGAAGCACGTAACCCTGAGAAC 2152920 Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231 || | || || |||||| | | |||||||| || || | || ||| || |||| Sbjct 2152919 ACCGTATTCGACGCTAAAAGGCTTATTGGAAGGAGATTCGACGACAAGACCGTACAGGAT 2152860 Query 550232 GATATGAAGCATTGGCCTTTCCAAATTGTTAATGTT-TC--TGGAAAACCTTATATTGAA 550288 || ||||| || ||||| ||| | | || | | || ||| ||||| || || Sbjct 2152859 GACATGAAACACTGGCCATTCAAGGTCACCAACGGTGTCGGTGGTAAACCAACCATCGAG 2152800 Query 550289 GCTACTCATGAAGGATCTGTTAAACAATTTTCACC-AGAACAAATTTCATCTATGGTTTT 550347 | || | | ||| | || | || |||| |||| |||||||||| ||||| | Sbjct 2152799 GTCAC-CTTCCAGGGACAAAAGAAGAGCTTCCACCCAGAAGAAATTTCATCCATGGTGCT 2152741 Query 550348 AATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAA-GTTACGGATGCAGTAA 550406 || |||||||| ||| ||| | ||| | ||| |||| || | |||||| || | Sbjct 2152740 CATCAAAATGAAGGAAATTGCC-GAGCTGTACCTGGGTAAGACCGTAAAGGATGCCGTCA 2152682 Query 550407 TAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTA 550466 | || ||||| || || || || ||||| || | || ||||| || || ||||| | Sbjct 2152681 TCACCGTACCCGCCTACTTCAACGACTCCCAGAGGCAGGCTACCAAGGACGCTGGTACCA 2152622 Query 550467 TTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATG 550526 ||||||| || || ||| | ||||| ||||| ||||| || ||||| || |||| || | Sbjct 2152621 TTGCTGGTCTCAACGTTATGCGTATCATCAACGAACCCACCGCTGCCGCCATTGCCTACG 2152562 Query 550527 GACTTGATAAACATAATGATC--AAGAACTTAATGTACTCATCTTTGATTGTGGAGGT 550582 | | || || | |||| |||| || ||||||||||| ||| ||| ||| Sbjct 2152561 GTTTGGACAAGAAGG--GATCTGAAGAGAAGAACGTACTCATCTTCGATCTTGGTGGT 2152506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029295259616860