Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bovis_20[genbank_20GCA_5F000165395.1_202007-09-06] 14 sequences; 8,179,706 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq2 91.5 3e-13 >seq2 Length=821816 Score = 91.5 bits (100), Expect = 3e-13 Identities = 305/467 (65%), Gaps = 11/467 (2%) Strand=Plus/Plus Query 213778 CGGGACACATGAGGCTCCAGTCCCCGTCAT-CTCTGACTCTCTGCATGAACAGGTCCGGG 213836 |||||||||| || ||||||| |||| ||| || | || ||| |||||||| || Sbjct 732670 CGGGACACATCAGTGTCCAGTCACCGTTGGACTCA-ACACGCTTCATAAACAGGTCAGGA 732728 Query 213837 ACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGC 213896 | ||||| || ||||| || | || | || || | || ||| |||||| Sbjct 732729 ATCCACAAAGCATAGAACAAATCACGGGCGCGAGCTTCCTCAGCACCGTGGTTCTTGCGC 732788 Query 213897 AGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCC 213956 | || |||||||| | ||||| || ||||| ||||| | |||||||||||||| || Sbjct 732789 AAGTCCAGAAAGTCCATAATGTCAGCATGCCATGGCTCAAGGTAGATGGCAAAGGAACCT 732848 Query 213957 GGCCTCTTG---CCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACG 214013 | |||| || |||||||| || | || |||||| || || | | Sbjct 732849 TTACGCTTGCCACCACCCTGGTCAACATAACGAGCAGTGGAGTTGAATATACGTAACATT 732908 Query 214014 GGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGG 214073 || || || |||||| || |||||||| || || || | ||| |||||| | Sbjct 732909 GGGACTAGACCGTTGCTCTTGCCGTTGGTACCACGAATGTAAGCGCCACTGGCCCTGATC 732968 Query 214074 TTG-CTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCAC 214132 ||| || | | || || || ||||| || ||||| || | ||| || | ||| Sbjct 732969 TTGTGACAAGCA-AGGCCAATACCACCAGCACACTTGCTAATGAAGGCACACTGGGTCAA 733027 Query 214133 AGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAG 214192 |||||| | || || |||| | |||||| | | || ||| ||||| || || || | Sbjct 733028 AGTCTCGAAAATACCAGCCAAGGAGTCATCCTTCATGTCCAGTAAGAAACAACTGGACAT 733087 Query 214193 CTGGGGCCTGGACGAG--CCAGAGTTGAAAAGCGTGGGGCTGGCATG 214237 ||| || | || ||| || ||| ||| | ||||| | ||||| Sbjct 733088 CTGAGG--TCGAGGAGTACCGGAGAAGAACAAGGTGGGAGTCGCATG 733132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931532636981760