Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bovis_20[genbank_20GCA_5F000165395.1_202007-09-06] 14 sequences; 8,179,706 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq2 87.8 3e-12 >seq2 Length=821816 Score = 87.8 bits (96), Expect = 3e-12 Identities = 307/474 (65%), Gaps = 4/474 (1%) Strand=Plus/Plus Query 221997 CGGGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGA 222056 ||||||||||||| |||||| |||| | || | || ||| || ||||| || | Sbjct 732670 CGGGACACATCAGTGTCCAGTCACCGTTGGACTCAACACGCTTCATAAACAGGTCAGGAA 732729 Query 222057 TCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCA 222116 |||||| || | || | ||| | || || ||||| | |||| ||| || | || Sbjct 732730 TCCACAAAGCATAGAACAAATCACGGGCGCGAGCTTCCTCAGCACCGTGGTTCTTGCGCA 732789 Query 222117 GATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGG 222176 |||| ||| || | ||||||||| ||||| ||||| || |||| ||| | | || Sbjct 732790 AGTCCAGAAAGTCCATAATGTCAGCATGCCATGGCTCAAGGTAGATGGCAAAGGAACCTT 732849 Query 222177 GTCGCTTGTTGCCACCCTGATCCACCATCCTCTCCAG-AGCGTTGAAGATGCGAAGGGTC 222235 |||||| |||||||| | || ||| ||| | |||||| || || | | Sbjct 732850 TACGCTTGCCACCACCCTGGT-CAACATAACGAGCAGTGGAGTTGAATATACGTAACATT 732908 Query 222236 GGTACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGG 222295 || || || |||||| |||||||| || |||||| || || | |||||| | Sbjct 732909 GGGACTAGACCGTTGCTCTTGCCGTTGGTACCACGAATGTAAGCGCCACTGGCCCTGATC 732968 Query 222296 TTACTGGC-AGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAG 222354 || || | || | ||| |||||||| || || || | ||| || | | Sbjct 732969 TT-GTGACAAGCAAGGCCAATACCACCAGCACACTTGCTAATGAAGGCACACTGGGTCAA 733027 Query 222355 AGTGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACAT 222414 ||| || | || || ||| ||||| ||||| | || ||| | |||||| ||||| Sbjct 733028 AGTCTCGAAAATACCAGCCAAGGAGTCATCCTTCATGTCCAGTAAGAAACAACTGGACAT 733087 Query 222415 CTGAGATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTA 222468 ||||| | | | || || | |||| |||||| | || || || ||||| Sbjct 733088 CTGAGGTCGAGGAGTACCGGAGAAGAACAAGGTGGGAGTCGCATGAGTGAAGTA 733141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844637452160