Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bovis_20[genbank_20GCA_5F000165395.1_202007-09-06] 14 sequences; 8,179,706 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq11 105 1e-17 seq10 102 1e-16 >seq11 Length=827912 Score = 105 bits (116), Expect = 1e-17 Identities = 165/236 (70%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 171837 ATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAA 171896 || |||||||| || | |||| |||||||| | |||| ||| || || || || Sbjct 715769 ATGATACCACCCCTCAAACGTAGAACTAAATGGAGAGTACTCTCCTTCTGGATGTTGTAG 715828 Query 171897 TCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCA 171956 || || || | || | || ||||| || ||||||||||| || || | ||| ||||| Sbjct 715829 TCAGACAACGTACGACCATCTTCCAACTGCTTACCAGCAAAGATCAAACGCTGCTGGTCT 715888 Query 171957 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGAT 172016 || || || || || || || || || || || ||||| ||||| || | Sbjct 715889 GGGGGAATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTTTCGATAGTGTCACTGGGC 715948 Query 172017 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 || || || | |||||||||||||| ||||| ||||||| ||| |||||||| || Sbjct 715949 TCAACCTCCAATGTAATGGTTTTACCCGTTAAGGTTTTAACGAAAATCTGCATCTT 716004 >seq10 Length=1797577 Score = 102 bits (112), Expect = 1e-16 Identities = 107/141 (76%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 39116 ATATAGTAAACATGCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACT 39175 ||||| |||||| ||||||| | |||| ||||||||||| | |||| ||| || || Sbjct 1461226 ATATATGAAACATCCAAAATCTGCGTGTAGTCCTTCGTCCCTTGCAATAAGTTCGTTGCT 1461285 Query 39176 AAAAGTTAATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACT 39235 ||| || || |||||||| | || | ||||||||||||||||| | |||||| | Sbjct 1461286 AAAGGTCAACCCTGGCATGAGACCACGTTTTTTAAGCCAAAATATAGCACAAAAACTTCC 1461345 Query 39236 AGAAAAGAATATACCCTCCAC 39256 |||||| ||||| || || || Sbjct 1461346 AGAAAAAAATATGCCTTCAAC 1461366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905135841601200