Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bovis_20[genbank_20GCA_5F000165395.1_202007-09-06] 14 sequences; 8,179,706 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq2 95.1 1e-13 seq10 93.3 5e-13 >seq2 Length=821816 Score = 95.1 bits (104), Expect = 1e-13 Identities = 108/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 1627334 GGTTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGTTGGTGATGA 1627393 |||||||||| || || || ||||||||||| |||||| ||| ||||| | Sbjct 731809 GGTTGACCACAAAGAATTCACCACTCAGCACGCGGCGGTAGTAGATATTGCTGGTGTAGG 731868 Query 1627394 CCTCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCA 1627453 |||| ||| |||| |||||||||| ||||| || || | || || |||||| |||||| Sbjct 731869 GCTCGAACGACTCGTTGTTGCCCAGAATCTGTGATGTGGATGCTGTTGGCATGGGCGCCA 731928 Query 1627454 CGAGGAGCGAGTTGCGCAGGCCGTG 1627478 || ||||||||||| | ||||| Sbjct 731929 GGAATAGCGAGTTGCGTAACCCGTG 731953 >seq10 Length=1797577 Score = 93.3 bits (102), Expect = 5e-13 Identities = 80/99 (81%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 1254450 ATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATG 1254509 |||||||||| |||||||||| || |||||||||| ||||| ||||| ||||| | Sbjct 668983 ATGCGGTCGAAAATGTCGTTGATGAATGAGTTCATGATAGACATAGACTTCTTGGACACA 669042 Query 1254510 CCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAGATG 1254548 || || |||||||||||||| | ||||||||||||| Sbjct 669043 CCAGTTTCAGGGTGCACCTGCTTCAACACCTTGTAGATG 669081 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107138051094438