Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bovis_20[genbank_20GCA_5F000165395.1_202007-09-06] 14 sequences; 8,179,706 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq10 113 7e-19 seq2 93.3 7e-13 >seq10 Length=1797577 Score = 113 bits (124), Expect = 7e-19 Identities = 174/243 (72%), Gaps = 4/243 (2%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||| || ||||||||||| || || |||||||| ||| || || ||| | | Sbjct 668837 TGTACTTGGTTACAGCCTTGGTACCTTCAGAAACGGCGTGTTTGGAAAGCTCACCGGGAA 668896 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||||| || || || || || || || | || || ||| | |||||| || | Sbjct 668897 GAAGTAGGCGTACAGCAGTTTGAATTTCACGTGAGCTGAGTGTGCTCTTCTTGTT-GTAC 668955 Query 1485590 GCGCCAGG-CGGCCGGCCTCG-GTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 | | | | ||||| | ||| |||||||||| |||||||||| || ||||| Sbjct 668956 CTGATAAGTCTTGTAGCCTCCAGAGCC-ATGCGGTCGAAAATGTCGTTGATGAATGAGTT 669014 Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707 |||||| ||||| || || ||||| | || || |||||||||||||| | |||||| Sbjct 669015 CATGATAGACATAGACTTCTTGGACACACCAGTTTCAGGGTGCACCTGCTTCAACACCTT 669074 Query 1485708 GTA 1485710 ||| Sbjct 669075 GTA 669077 >seq2 Length=821816 Score = 93.3 bits (102), Expect = 7e-13 Identities = 107/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 2069603 GGTTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGCTCGTGATGA 2069662 |||||||||| || || || ||||||||||| |||||| ||||| ||| | Sbjct 731809 GGTTGACCACAAAGAATTCACCACTCAGCACGCGGCGGTAGTAGATATTGCTGGTGTAGG 731868 Query 2069663 CCTCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCA 2069722 |||| ||| |||| |||||||||| ||||| || || | || || |||||| |||||| Sbjct 731869 GCTCGAACGACTCGTTGTTGCCCAGAATCTGTGATGTGGATGCTGTTGGCATGGGCGCCA 731928 Query 2069723 CGAGCAGCGAGTTGCGCAGGCCGT 2069746 || ||||||||||| | |||| Sbjct 731929 GGAATAGCGAGTTGCGTAACCCGT 731952 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916244910756146