Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bovis_20[genbank_20GCA_5F000165395.1_202007-09-06] 14 sequences; 8,179,706 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq10 102 8e-17 seq11 89.7 5e-13 >seq10 Length=1797577 Score = 102 bits (112), Expect = 8e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGT 133527 ||| ||||| || ||||| || || ||| ||| | || || | |||||| || || Sbjct 1343917 CTCCTTCTGGATGTTGTAGTCAGACAACGTACGACCA-TCTTCCAACTGCTTACCAGCAA 1343975 Query 133528 AAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCT 133587 | || | ||||||||||| || || || || |||||||| ||||||| ||||| | Sbjct 1343976 AGATCAAACGCTGCTGGTCTGGGGGAATACCCTCCTTGTCCTGGATCTTTGCCTTGACGT 1344035 Query 133588 GCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTA 133647 || | |||||| |||||||||| || | ||||| ||| || || || ||||| || | Sbjct 1344036 TTTCGATAGTGTCGCTGGGCTCCACCTCCAAGGTGATGGTCTTACCAGTAAGAGTCTTGA 1344095 Query 133648 CGAAAATCTGCAT 133660 | ||||| ||||| Sbjct 1344096 CAAAAATTTGCAT 1344108 Score = 102 bits (112), Expect = 8e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGT 133527 ||| ||||| || ||||| || || ||| ||| | || || | |||||| || || Sbjct 1344145 CTCCTTCTGGATGTTGTAGTCAGACAACGTACGACCA-TCTTCCAACTGCTTACCAGCAA 1344203 Query 133528 AAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCT 133587 | || | ||||||||||| || || || || |||||||| ||||||| ||||| | Sbjct 1344204 AGATCAAACGCTGCTGGTCTGGGGGAATACCCTCCTTGTCCTGGATCTTTGCCTTGACGT 1344263 Query 133588 GCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTA 133647 || | |||||| |||||||||| || | ||||| ||| || || || ||||| || | Sbjct 1344264 TTTCGATAGTGTCGCTGGGCTCCACCTCCAAGGTGATGGTCTTACCAGTAAGAGTCTTGA 1344323 Query 133648 CGAAAATCTGCAT 133660 | ||||| ||||| Sbjct 1344324 CAAAAATTTGCAT 1344336 >seq11 Length=827912 Score = 89.7 bits (98), Expect = 5e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGT 133527 ||| ||||| || ||||| || || ||| ||| | || || | |||||| || || Sbjct 715810 CTCCTTCTGGATGTTGTAGTCAGACAACGTACGACCA-TCTTCCAACTGCTTACCAGCAA 715868 Query 133528 AAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCT 133587 | || | ||||||||||| || || || || |||||||| |||||| ||||| | Sbjct 715869 AGATCAAACGCTGCTGGTCTGGGGGAATACCCTCCTTGTCCTGGATCTTGGCCTTGACAT 715928 Query 133588 GCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTA 133647 || | ||||| ||||||| || || | || | |||||| || || | ||||| | Sbjct 715929 TTTCGATAGTGTCACTGGGCTCAACCTCCAATGTAATGGTTTTACCCGTTAAGGTTTTAA 715988 Query 133648 CGAAAATCTGCAT 133660 ||||||||||||| Sbjct 715989 CGAAAATCTGCAT 716001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420715401360