Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bovis_20[genbank_20GCA_5F000165395.1_202007-09-06] 14 sequences; 8,179,706 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq10 100 7e-16 >seq10 Length=1797577 Score = 100 bits (110), Expect = 7e-16 Identities = 146/205 (71%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237 ||||| ||| || || || || || || ||||| ||||| ||||| ||||| | Sbjct 1344328 TTTTGTCAAGACTCTTACTGGTAAGACCATCACCTTGGAGGTGGAGCCCAGCGACACTAT 1344269 Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACT 206297 |||| || ||| |||||| || || || || || ||| || ||| || | | Sbjct 1344268 CGAAAACGTCAAGGCAAAGATCCAGGACAAGGAGGGTATTCCCCCAGACCAGCAGCGTTT 1344209 Query 206298 TATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAA 206357 ||||| || || ||||||||||||||||| | || ||| | || |||||| ||||||| Sbjct 1344208 GATCTTTGCTGGTAAGCAGTTGGAAGATGGTCGTACGTTGTCTGACTACAACATCCAGAA 1344149 Query 206358 AGAGTCTACTCTTCACCTTGTTTTG 206382 ||| |||||| ||||| |||||| Sbjct 1344148 GGAGAGTACTCTCCACCTAGTTTTG 1344124 Score = 98.7 bits (108), Expect = 2e-15 Identities = 145/204 (71%), Gaps = 1/204 (0%) Strand=Plus/Minus Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237 ||||| ||| || || || || || || ||||| ||||| ||||| ||||| | Sbjct 1344100 TTTTGTCAAGACTCTTACTGGTAAGACCATCACCTTGGAGGTGGAGCCCAGCGACACTAT 1344041 Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACT 206297 |||| || ||| |||||| || || || || || ||| || ||| || | | Sbjct 1344040 CGAAAACGTCAAGGCAAAGATCCAGGACAAGGAGGGTATTCCCCCAGACCAGCAGCGTTT 1343981 Query 206298 TATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAA 206357 ||||| || || ||||||||||||||||| | || ||| | || |||||| ||||||| Sbjct 1343980 GATCTTTGCTGGTAAGCAGTTGGAAGATGGTCGTACGTTGTCTGACTACAACATCCAGAA 1343921 Query 206358 AGAGTCTACTCTTCACCTTGTTTT 206381 ||| |||||| ||||| ||||| Sbjct 1343920 GGAGAGTACTCTCCACCTAGTTTT 1343897 Score = 91.5 bits (100), Expect = 3e-13 Identities = 133/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 206195 CAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAAA 206254 |||| || || ||||| ||||| ||||| ||||| ||||| || ||| || Sbjct 1344539 CAGGTAAGACCATCACCTTGGAGGTGGAGCCCAGCGACACTATCGAAAACGTCAAGGCAA 1344480 Query 206255 AGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAGC 206314 |||| || || || || || ||| || ||| || | | ||||| || || |||| Sbjct 1344479 AGATCCAGGACAAGGAGGGTATTCCCCCAGACCAGCAGCGTTTGATCTTTGCTGGTAAGC 1344420 Query 206315 AGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCACC 206374 ||||||||||||| | || ||| | || |||||| ||||||| ||| ||||| |||| Sbjct 1344419 AGTTGGAAGATGGTCGTACGTTGTCTGACTACAACATCCAGAAGGAGAGCACTCTCCACC 1344360 Query 206375 TTGTTTTG 206382 | |||||| Sbjct 1344359 TAGTTTTG 1344352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181820588010894