Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bovis_20[genbank_20GCA_5F000165395.1_202007-09-06] 14 sequences; 8,179,706 total letters Query= NC_026242.1 Length=145704 Score E Sequences producing significant alignments: (Bits) Value seq8 105 6e-18 seq9 93.3 4e-14 >seq8 Length=1729419 Score = 105 bits (116), Expect = 6e-18 Identities = 69/76 (91%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 39778 GCGGGTATGGTCTAGTGGTTATGGCGTCTGTTTTACACGCAGAAGGTCCCGGGTTCAATC 39837 ||||| ||||||||||||||||| |||||| |||||||||||||| ||||| |||| ||| Sbjct 334562 GCGGGCATGGTCTAGTGGTTATGACGTCTGCTTTACACGCAGAAGATCCCGAGTTCGATC 334621 Query 39838 CCCGGTGCCCGTATTT 39853 | |||||||||||||| Sbjct 334622 CTCGGTGCCCGTATTT 334637 >seq9 Length=2593320 Score = 93.3 bits (102), Expect = 4e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 39778 GCGGGTATGGTCTAGTGGTTATGGCGTCTGTTTTACACGCAGAAGGTCCCGGGTTCAATC 39837 ||||| |||||||||||| |||| |||||| | ||||||||||| ||||| |||| ||| Sbjct 40529 GCGGGCATGGTCTAGTGGCTATGACGTCTGCCTAACACGCAGAAGATCCCGAGTTCGATC 40470 Query 39838 CCCGGTGCCCGTATTT 39853 | |||||||||||||| Sbjct 40469 CTCGGTGCCCGTATTT 40454 Score = 86.0 bits (94), Expect = 6e-12 Identities = 67/80 (84%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 39774 TCAGGCGGGTATGGTCTAGTGGTTATGGCGTCTGTTTTACACGCAGAAGGTCCCGGGTTC 39833 ||||||||| ||||||||||| |||| || ||| || |||||||| || ||||| |||| Sbjct 40756 TCAGGCGGGCGTGGTCTAGTGGCTATGACGCCTGCTTCACACGCAGGAGATCCCGAGTTC 40697 Query 39834 AATCCCCGGTGCCCGTATTT 39853 |||| ||| |||||||||| Sbjct 40696 GATCCTCGGCGCCCGTATTT 40677 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 466124718428160