Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bovis_20[genbank_20GCA_5F000165395.1_202007-09-06] 14 sequences; 8,179,706 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq10 95.1 2e-13 seq2 93.3 6e-13 >seq10 Length=1797577 Score = 95.1 bits (104), Expect = 2e-13 Identities = 162/233 (70%), Gaps = 8/233 (3%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||||||||||| | |||||||||||||| ||| | || | ||||| ||||| Sbjct 669080 ATCTACAAGGTGTTGAAGCAGGTGCACCCTGAAACTGGTGTG------TCCAAGAAGTCT 669027 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCAC-CGAGGCCGG 725029 ||||| ||||||||||| || |||||||||| |||||||||| ||| | ||||| Sbjct 669026 ATGTCTATCATGAACTCATTCATCAACGACATTTTCGACCGCAT-GGCTCTGGAGGCTAC 668968 Query 725030 TCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGT 725089 | || | | ||||||| | ||| || || | || || || || || || || Sbjct 668967 AAGACTTATCAGGTACAACAAGAAGAGCACACTCAGCTCACGTGAAATTCAAACTGCTGT 668908 Query 725090 GCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||||| | | | ||| || || ||| |||||||| || || || |||| Sbjct 668907 ACGCCTACTTCTTCCCGGTGAGCTTTCCAAACACGCCGTTTCTGAAGGTACCA 668855 >seq2 Length=821816 Score = 93.3 bits (102), Expect = 6e-13 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 262924 CGCAACTCGTTGCTCGTGGCGCTCATGCCCACGGCCACGACGTCGCAGATCCTGGGCAAC 262983 ||||||||| | || |||||| |||||| || || | || || ||||| ||||||||| Sbjct 731944 CGCAACTCGCTATTCCTGGCGCCCATGCCAACAGCATCCACATCACAGATTCTGGGCAAC 731885 Query 262984 ACCGAGGCGTTCGAGGTCATCACGAGCAACATCTACACGCGCCGCGTGCTCTCGGGCGAC 263043 | |||| |||||||| | ||| ||||| |||||| ||||||||||| || || Sbjct 731884 AACGAGTCGTTCGAGCCCTACACCAGCAATATCTACTACCGCCGCGTGCTGAGTGGTGAA 731825 Query 263044 TTTACCGTGGTCAACC 263059 || |||||||||| Sbjct 731824 TTCTTTGTGGTCAACC 731809 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177809849674268