Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bovis_20[genbank_20GCA_5F000165395.1_202007-09-06] 14 sequences; 8,179,706 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq11 147 2e-30 seq10 143 2e-29 >seq11 Length=827912 Score = 147 bits (162), Expect = 2e-30 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 || ||||| | ||||||||||| || |||||||| || | ||| || || | || ||| Sbjct 715793 ACTAAATGGAGAGTACTCTCCTTCTGGATGTTGTAGTCAGACAACGTACGACCATCTTCC 715852 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 | ||||||||| ||||| ||||| ||||||||||| | |||| | |||||||||| | Sbjct 715853 AACTGCTTACCAGCAAAGATCAAACGCTGCTGGTCTGGGGGAATACCCTCCTTGTCCTGG 715912 Query 35648 ATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTA 35707 ||||| ||| | | || | | ||||| || | || ||||||| || || |||||| Sbjct 715913 ATCTTGGCCTTGACATTTTCGATAGTGTCACTGGGCTCAACCTCCAATGTAATGGTTTTA 715972 Query 35708 CCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||| || ||||| || || |||||||| Sbjct 715973 CCCGTTAAGGTTTTAACGAAAATCTGCAT 716001 >seq10 Length=1797577 Score = 143 bits (158), Expect = 2e-29 Identities = 150/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 35540 GTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCC 35599 ||||||||||| || |||||||| || | ||| || || | || |||| ||||||||| Sbjct 1343912 GTACTCTCCTTCTGGATGTTGTAGTCAGACAACGTACGACCATCTTCCAACTGCTTACCA 1343971 Query 35600 GCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTC 35659 ||||| ||||| ||||||||||| | |||| | |||||||||| ||||||| ||| Sbjct 1343972 GCAAAGATCAAACGCTGCTGGTCTGGGGGAATACCCTCCTTGTCCTGGATCTTTGCCTTG 1344031 Query 35660 AGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTT 35719 | || | | |||||||| | |||||||||| ||||| || ||||| || | ||| Sbjct 1344032 ACGTTTTCGATAGTGTCGCTGGGCTCCACCTCCAAGGTGATGGTCTTACCAGTAAGAGTC 1344091 Query 35720 TTCACAAATATCTGCAT 35736 || ||||| || ||||| Sbjct 1344092 TTGACAAAAATTTGCAT 1344108 Score = 143 bits (158), Expect = 2e-29 Identities = 150/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 35540 GTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCC 35599 ||||||||||| || |||||||| || | ||| || || | || |||| ||||||||| Sbjct 1344140 GTACTCTCCTTCTGGATGTTGTAGTCAGACAACGTACGACCATCTTCCAACTGCTTACCA 1344199 Query 35600 GCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTC 35659 ||||| ||||| ||||||||||| | |||| | |||||||||| ||||||| ||| Sbjct 1344200 GCAAAGATCAAACGCTGCTGGTCTGGGGGAATACCCTCCTTGTCCTGGATCTTTGCCTTG 1344259 Query 35660 AGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTT 35719 | || | | |||||||| | |||||||||| ||||| || ||||| || | ||| Sbjct 1344260 ACGTTTTCGATAGTGTCGCTGGGCTCCACCTCCAAGGTGATGGTCTTACCAGTAAGAGTC 1344319 Query 35720 TTCACAAATATCTGCAT 35736 || ||||| || ||||| Sbjct 1344320 TTGACAAAAATTTGCAT 1344336 Score = 122 bits (134), Expect = 8e-23 Identities = 129/170 (76%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 35540 GTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCC 35599 || |||||||| || |||||||| || | ||| || || | || |||| ||||||||| Sbjct 1344368 GTGCTCTCCTTCTGGATGTTGTAGTCAGACAACGTACGACCATCTTCCAACTGCTTACCA 1344427 Query 35600 GCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTC 35659 ||||| ||||| ||||||||||| | |||| | |||||||||| ||||||| ||| Sbjct 1344428 GCAAAGATCAAACGCTGCTGGTCTGGGGGAATACCCTCCTTGTCCTGGATCTTTGCCTTG 1344487 Query 35660 AGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACC 35709 | || | | |||||||| | |||||||||| ||||| || ||||| Sbjct 1344488 ACGTTTTCGATAGTGTCGCTGGGCTCCACCTCCAAGGTGATGGTCTTACC 1344537 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450793521111120