Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bovis_20[genbank_20GCA_5F000165395.1_202007-09-06] 14 sequences; 8,179,706 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq2 116 3e-21 >seq2 Length=821816 Score = 116 bits (128), Expect = 3e-21 Identities = 353/538 (66%), Gaps = 8/538 (1%) Strand=Plus/Plus Query 130401 CACTGTTTTCGACGGTGAATTGAATGGCATTGGTGGCCGGCTTGGTGCGCAAATAATACA 130460 |||| | || || ||||||| ||| || | || || | || ||||| || || || Sbjct 731458 CACTCGTGTCAACAGTGAATTTAATAGCGTCAGTAGCAGCCTGTGTGCGTAAGTAGTAGG 731517 Query 130461 TGCCTGTTTTGAGTCCAATTTTGTGTCCATAATTGTGGATGCTGCACATTGTTTG--GTA 130518 | || || || || || | || ||||| ||| || ||| || | ||| | | Sbjct 731518 TACCGGTCTTCAGACCCTTCTTCCAGCCATAGAAGTGCATACTGGTCA--GCTTGCCGAA 731575 Query 130519 ATTGGGTTGCGCCACGAATATGTTGAGCGATTGCGATTGATCAATAAAAGCGCCCCTGTC 130578 | | || || | | | | || ||||||||||| || |||||||| ||| || | ||| Sbjct 731576 AGTAGGCTGGTCAAGGTAGATATTGAGCGATTGTGACTGATCAATGAAAATACCACGGTC 731635 Query 130579 TGCAGCCATGTCGAGCATGGTTTTATTTTTCATCTCCCAAGCGGTCTTGTATAGATCCCT 130638 ||||||||||||| ||| | || | || || |||||| |||||||||| || ||| | Sbjct 731636 CGCAGCCATGTCGATAATGCTCTTCTGCTTAATTTCCCAAACGGTCTTGTAAAGGTCCTT 731695 Query 130639 AATGTGTTTGGGTATGCGCGCAATCGATTGAACGCTA-CCGTTGTTGGCTAT-AATTTCG 130696 ||||| | || || | | |||| ||| || | ||||||| || || || ||| Sbjct 731696 GATGTGCTGAGGGATACCCTCAATGTGACGAA-GCGACCCGTTGTAAGCAATCAACTTC- 731753 Query 130697 TTGCGCATACTTTTATCGTACAATCCAAGCTGTACAAGATCTTTTACCAAATGATTATTA 130756 | |||| | ||| | | ||||| | ||| ||||| | |||||| || Sbjct 731754 TCCTTCATAGCGTCATCCCAAAGGCCAAGGTCTACCAGATCACGCAGTAAATGAGGGTTG 731813 Query 130757 ATGATTTGAAAATCACCAGCCAGGACGCGTCTAACGTAAATGTTGCTCGTGAACGGTTCA 130816 | | || |||||| ||| ||||| | ||| || ||||| ||| | || || Sbjct 731814 ACCACAAAGAATTCACCACTCAGCACGCGGCGGTAGTAGATATTGCTGGTGTAGGGCTCG 731873 Query 130817 AAGGATTCGTTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCACTAAT 130876 || || ||||||||||| | || |||| ||| | ||| || |||||| |||| ||| Sbjct 731874 AACGACTCGTTGTTGCCCAGAATCTGTGATGTGGATGCTGTTGGCATGGGCGCCAGGAAT 731933 Query 130877 AGAGAATTACGAAGACCGTGCGTCGTGATTTTTCGCTTCAATTCATCCCAATCCCATA 130934 || || || || | ||||| | | || |||| | ||||||| ||||||| Sbjct 731934 AGCGAGTTGCGTAACCCGTGTTTGGCCATACGCTGCTTGAGGCCATCCCAGTCCCATA 731991 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424934327495568