Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bovis_20[genbank_20GCA_5F000165395.1_202007-09-06] 14 sequences; 8,179,706 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq10 107 2e-18 >seq10 Length=1797577 Score = 107 bits (118), Expect = 2e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| || ||||| || || ||| | || || | || ||||| || | Sbjct 1344336 ATGCAAATTTTTGTCAAGACTCTTACTGGTAAGACCATCACCTTGGAGGTGGAGCCCAGC 1344277 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| ||| || || ||||| || || || || || || || Sbjct 1344276 GACACTATCGAAAACGTCAAGGCAAAGATCCAGGACAAGGAGGGTATTCCCCCAGACCAG 1344217 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTT-TCCGATTACAA 27166 |||||||| || | || || || || |||||||| || || |||| || || ||||| Sbjct 1344216 CAGCGTTTGATCTTTGCTGGTAAGCAGTTGGAAGATGGT-CGTACGTTGTCTGACTACAA 1344158 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| || |||||| || | || | |||||||||||| ||||||| || Sbjct 1344157 CATCCAGAAGGAGAGTACTCTCCACCTAGTTTTGCGTTTGAGGGGTGGTAT 1344107 Score = 86.0 bits (94), Expect = 5e-12 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 27015 GGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAA 27074 || ||| | || || | || ||||| || |||| | || || | ||||| ||| Sbjct 1344537 GGTAAGACCATCACCTTGGAGGTGGAGCCCAGCGACACTATCGAAAACGTCAAGGCAAAG 1344478 Query 27075 ATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAA 27134 || || ||||| || || || || || || || |||||||| || | || || || || Sbjct 1344477 ATCCAGGACAAGGAGGGTATTCCCCCAGACCAGCAGCGTTTGATCTTTGCTGGTAAGCAG 1344418 Query 27135 TTGGAAGACAGTTCGACCGTT-TCCGATTACAACATTCAAAAGGAGTCGACCTTACATTT 27193 |||||||| || || |||| || || |||||||| || |||||| || | || | Sbjct 1344417 TTGGAAGATGGT-CGTACGTTGTCTGACTACAACATCCAGAAGGAGAGCACTCTCCACCT 1344359 Query 27194 GGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||||||||| ||||||| || Sbjct 1344358 AGTTTTGCGTTTGAGGGGTGGTAT 1344335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434918323889280