Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bovis_20[genbank_20GCA_5F000165395.1_202007-09-06] 14 sequences; 8,179,706 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq2 132 7e-26 seq10 98.7 1e-15 >seq2 Length=821816 Score = 132 bits (146), Expect = 7e-26 Identities = 563/880 (64%), Gaps = 11/880 (1%) Strand=Plus/Plus Query 77733 ATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTA 77792 |||||| ||| || ||| |||| ||||| |||||||| || ||||| ||| | Sbjct 732435 ATCTCGCAACACAGGTTAGAGGATTTAATAGTACCCAGATTCTGCTGGTTCGACTTGGCA 732494 Query 77793 TTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATA 77852 ||||| | |||||||| || |||||||| | || || || ||||| || | || Sbjct 732495 TTGCAAGCATCCTTATAGAGCATAAACGGGTTGCCAGTCTCTATCTGACTTTGCAATATG 732554 Query 77853 GATTTCCAGACGACTCTAGCTTTTATCATAGATTTGTATC---GCCTCTCTCTTTCATAT 77909 | ||| | | ||| | | |||| || | | | ||| | || ||| Sbjct 732555 GCAAACCACAGGG-TCTG--TGCTGGGATAGTCTTACGACCAAGACCCTCCATCTCGTAT 732611 Query 77910 TGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTT 77969 | || ||||| || || ||||| ||||||||||||| || ||| |||| |||| Sbjct 732612 TTGGTGTATAGGGCCTCGAACTCATCACCCCAAACATCATATAAGCCACGGCACTCATCG 732671 Query 77970 GGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATC 78029 || ||||||| || ||||||||| | || ||| || |||||||| || ||||| ||| Sbjct 732672 GGACACATCAGTGTCCAGTCACCGTTGGACTCAACACGCTTCATAAACAGGTCAGGAATC 732731 Query 78030 CATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGA 78089 || | |||| || | ||| |||| | | ||| ||| || ||||| | Sbjct 732732 CACAAAGCATAGAACAAATCACGGGCGCGAGCTTCCTCAGCACCGTGGTTCTTGCGCAAG 732791 Query 78090 TCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGT 78149 || ||||| |||||||| |||| ||||||||| || || || || || | || Sbjct 732792 TCCAGAAAGTCCATAATGTCAGCATGCCATGGCTCAAGGTAGATGGCAAAGGAACCTTTA 732851 Query 78150 CGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGA 78209 || || ||| ||||| || | ||| | || ||| || | | | |||||||| Sbjct 732852 CGCTTGCCACCACCCTGGTCAACATAACGAGCAGTGGAGTTGAATATACGTAACATTGGG 732911 Query 78210 ATAATACCGTTAGATGTT-CCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATT 78268 | | |||||| | | || || || || ||| ||| ||| ||||| || | || || Sbjct 732912 ACTAGACCGTT-GCTCTTGCCGTTGGTACCACGAATGTAAGCGCCACTGGCCCTGATCTT 732970 Query 78269 ACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGT 78328 | | | || || || || || ||| || | || || | |||| || Sbjct 732971 GTGACAAGCAAGGCCAATACCACCAGCACACTTGCTAATGAAGGCACACTGGGTCAAAGT 733030 Query 78329 ATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTG 78388 ||| | ||||| | | ||||||| |||||| || | ||||| || ||||| || Sbjct 733031 CTCGAAAATACCAGCCAAGGAGTCATCCTTCATGTCCAGTAAGAAACAACTGGACATCTG 733090 Query 78389 ATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGA 78448 | | || ||| || | || || || |||| ||||| || || | || | | Sbjct 733091 AGGTCGAGGAGTACCGGAGAAGAACAAGGTGGGAGTCGCATGAGTGAAGTACTTCTGACT 733150 Query 78449 AAGTAGATTGTATGTTTCAATAGCTGATTCTATGTC-CCATTGATGAATTCCTACCGCTA 78507 | | | ||| || | ||| | || ||||| ||| || || || || | | || Sbjct 733151 CATCAAGTGGTAGGTCTGAATGGTACGCTCAATGTCACCAGTG-TGGATACCAGCAGATA 733209 Query 78508 CACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATG 78567 ||||||| ||||| || ||||| | || || |||| | |||||| | || || | Sbjct 733210 CACGCATTAACATGTGTTGAGGACGCTCCACTATCTTGTCATTTATACGAAGTAAATAGG 733269 Query 78568 ATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-TGAAA 78606 | |||||||| || |||||||| |||| ||| ||||| Sbjct 733270 AACGCTCCAAAGTCTTCAAACCAAAGTAGTCGTACTGAAA 733309 >seq10 Length=1797577 Score = 98.7 bits (108), Expect = 1e-15 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 48135 ATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAAT 48194 || |||||| ||||||| || || ||||| || || ||| | |||||| ||| Sbjct 1461230 ATGAAACATCCAAAATCTGCGTGTAGTCCTTCGTCCCTTGCAATAAGTTCGTTGCTAAAG 1461289 Query 48195 GTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAA 48254 || | || ||||| || ||||||||||| ||||||||||| || ||| ||||||| Sbjct 1461290 GTCAACCCTGGCATGAGACCACGTTTTTTAAGCCAAAATATAGCACAAAAACTTCCAGAA 1461349 Query 48255 AAGAATATGCCTTCTACGGCCGCAAATGC 48283 || ||||||||||| || || ||| |||| Sbjct 1461350 AAAAATATGCCTTCAACTGCTGCATATGC 1461378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668678432960