Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bovis_20[genbank_20GCA_5F000165395.1_202007-09-06] 14 sequences; 8,179,706 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq10 134 1e-26 seq11 109 4e-19 >seq10 Length=1797577 Score = 134 bits (148), Expect = 1e-26 Identities = 170/234 (73%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || || |||| | ||| || ||||| || || |||||||| ||||||||||| Sbjct 1344103 TTGCATACCACCCCTCAAACGCAAAACTAGGTGGAGAGTACTCTCCTTCTGGATGTTGTA 1344162 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 || | | || | || |||| |||||| || |||||||||||||||||||| || Sbjct 1344163 GTCAGACAACGTACGACCATCTTCCAACTGCTTACCAGCAAAGATCAAACGCTGCTGGTC 1344222 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283 || || | ||| ||||| ||| ||||| ||| | || | || |||||| || Sbjct 1344223 TGGGGGAATACCCTCCTTGTCCTGGATCTTTGCCTTGACGTTTTCGATAGTGTCGCTGGG 1344282 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||||||| || || ||||| || || || ||||| || || |||||||| Sbjct 1344283 CTCCACCTCCAAGGTGATGGTCTTACCAGTAAGAGTCTTGACAAAAATTTGCAT 1344336 Score = 125 bits (138), Expect = 5e-24 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 44126 AACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCG 44185 || || ||||| || || |||||||| ||||||||||| || | | || | || Sbjct 1343897 AAAACTAGGTGGAGAGTACTCTCCTTCTGGATGTTGTAGTCAGACAACGTACGACCATCT 1343956 Query 44186 TCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCC 44245 |||| |||||| || |||||||||||||||||||| |||| || | ||| ||||| ||| Sbjct 1343957 TCCAACTGCTTACCAGCAAAGATCAAACGCTGCTGGTCTGGGGGAATACCCTCCTTGTCC 1344016 Query 44246 GTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305 ||||| ||| | || | || |||||| || |||||||||| || || ||| Sbjct 1344017 TGGATCTTTGCCTTGACGTTTTCGATAGTGTCGCTGGGCTCCACCTCCAAGGTGATGGTC 1344076 Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || || ||||| || || |||||||| Sbjct 1344077 TTACCAGTAAGAGTCTTGACAAAAATTTGCAT 1344108 Score = 116 bits (128), Expect = 3e-21 Identities = 150/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || || |||| | ||| || ||||| || ||||||||||| ||||||||||| Sbjct 1344331 TTGCATACCACCCCTCAAACGCAAAACTAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTA 1344390 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 || | | || | || |||| |||||| || |||||||||||||||||||| || Sbjct 1344391 GTCAGACAACGTACGACCATCTTCCAACTGCTTACCAGCAAAGATCAAACGCTGCTGGTC 1344450 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283 || || | ||| ||||| ||| ||||| ||| | || | || |||||| || Sbjct 1344451 TGGGGGAATACCCTCCTTGTCCTGGATCTTTGCCTTGACGTTTTCGATAGTGTCGCTGGG 1344510 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCC 44310 |||||||||| || || ||||| || Sbjct 1344511 CTCCACCTCCAAGGTGATGGTCTTACC 1344537 >seq11 Length=827912 Score = 109 bits (120), Expect = 4e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 44135 TGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGC 44194 || || || |||||||| ||||||||||| || | | || | || |||| |||| Sbjct 715799 TGGAGAGTACTCTCCTTCTGGATGTTGTAGTCAGACAACGTACGACCATCTTCCAACTGC 715858 Query 44195 TTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTC 44254 || || |||||||||||||||||||| |||| || | ||| ||||| ||| ||||| Sbjct 715859 TTACCAGCAAAGATCAAACGCTGCTGGTCTGGGGGAATACCCTCCTTGTCCTGGATCTTG 715918 Query 44255 TGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTG 44314 ||| | || | || ||||| || || ||||||| ||||| || || ||||| Sbjct 715919 GCCTTGACATTTTCGATAGTGTCACTGGGCTCAACCTCCAATGTAATGGTTTTACCCGTT 715978 Query 44315 AGGGTCTTCACGAAGATTTGCAT 44337 | ||| || ||||| || ||||| Sbjct 715979 AAGGTTTTAACGAAAATCTGCAT 716001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359990338576638