Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20divergens_20[genbank_20GCA_5F001077455.1_202014-09-06] 514 sequences; 10,797,556 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq356 93.3 9e-14 seq2 89.7 1e-12 >seq356 Length=876930 Score = 93.3 bits (102), Expect = 9e-14 Identities = 54/56 (96%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 165717 TAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCC 165772 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 299671 TAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCAGGGGTTCGAGCCCC 299726 >seq2 Length=2195431 Score = 89.7 bits (98), Expect = 1e-12 Identities = 181/263 (69%), Gaps = 8/263 (3%) Strand=Plus/Plus Query 281820 TTAATGTTATT-GCTCCCGACGTAATCCTGAGCCAGGTTGACGATTGTCCCCTGAAGCGA 281878 || |||||||| | |||| ||| | ||||| |||| |||| ||| || ||| || || Sbjct 840549 TTGATGTTATTTGATCCC-ACGAAGTCCTGTGCCATATTGATGATCGTTTGCTGTAGTGA 840607 Query 281879 TACCTCACCGTGGTGATAGGCGCTGTGTTCGGCAACATAACCACTGAACTGTGCTACCTT 281938 |||| ||||||||||| || || || || || || ||| ||| || |||||||| Sbjct 840608 CGCCTCCCCGTGGTGATAAGCCGAATGCTCTGCTACGTACCCAGTGAGTTGCGCTACCTT 840667 Query 281939 CACGTCTGATGTCAAGTTGCGTTTGA---AAGCGCAATATAATACTTTTCGTTGAGAAGG 281995 || | | | ||| || |||| || || |||| | || || || || ||| Sbjct 840668 ACATTCAGCTACTAGGTTACGCTTGAGACAACCG-AATAGA--ACCTTACGCTGCCCAGG 840724 Query 281996 CTTGAAACCATCAACGACAGACGGAATGCTGCGTTCCAGGTCATACCGCGAGAACAAAAT 282055 ||| | ||||| || || || || ||||| ||||| || || |||||| || Sbjct 840725 CTTCCACCCATCGACTACGGAGGGTATGCTACGTTCGGTATCGTAAATGGAGAACTGGAT 840784 Query 282056 AAGTTCCTTGTCAATGAAGTCGG 282078 ||||||||||| |||||| |||| Sbjct 840785 AAGTTCCTTGTTAATGAAATCGG 840807 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057817033567820