Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20divergens_20[genbank_20GCA_5F001077455.1_202014-09-06] 514 sequences; 10,797,556 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq190 113 4e-20 >seq190 Length=1127857 Score = 113 bits (124), Expect = 4e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 ||||| | || | |||| |||||||||||| || ||||| | ||||| | | || Sbjct 281376 AGCACTAGGTGAAGAGTGCTCTCCTTTTGAATATTGTAGTCAGAAAGGGTGCGACCATCT 281317 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 || ||||| ||||||||| |||| || | ||||||||| ||| | || ||||| || Sbjct 281316 TCAAGCTGCTTGCCCGCAAAAATCAGACGCTGCTGGTCTGGGGGAATACCCTCCTTATCC 281257 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 ||||| || || | ||| ||| |||| |||||| |||| |||||||| Sbjct 281256 TGAATCTTGGCCTTGACGTTTTCGATAGTGTCACTGGGCTCGACCTCCAAAGTAATGGTT 281197 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||||||| || || || || ||||||||||| Sbjct 281196 TTGCCGGTCAAAGTCTTTACGAATATTTGCAT 281165 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 20984 CTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATA 21043 ||||||||| || || ||||| | ||||| || | || || ||||| ||||||||| | Sbjct 280717 CTCCTTTTGGATATTGTAGTCAGAAAGGGTGCGGCCATCTTCAAGCTGCTTGCCCGCAAA 280658 Query 21044 AATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTG 21103 ||| || | ||||||||| ||| | || ||||| || ||||| || || | Sbjct 280657 AATCAGACGCTGCTGGTCTGGGGGAATACCCTCCTTATCCTGAATCTTGGCCTTGACGTT 280598 Query 21104 GCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGAC 21163 ||| ||| |||| |||||| |||| |||||||| |||||||| || || || || Sbjct 280597 TTCGATAGTGTCACTGGGCTCGACCTCCAAAGTAATGGTTTTGCCGGTCAAAGTCTTTAC 280538 Query 21164 AAATATTTGCAT 21175 ||||||||||| Sbjct 280537 GAATATTTGCAT 280526 Score = 95.1 bits (104), Expect = 1e-14 Identities = 132/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 ||||| | || | |||| ||||||||| ||||| ||||||| || || || | || Sbjct 626692 AGCACTAGGTGAAGAGTGCTCTCCTTTTGGATGTTGTAGTCCGAAAGAGTACGGCCATCT 626633 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 || ||||| ||||||||| |||| || | ||||||||| ||| | || ||||| || Sbjct 626632 TCAAGCTGCTTGCCCGCAAAAATCAGACGCTGCTGGTCTGGGGGAATACCCTCCTTATCC 626573 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 ||||| || || | ||| ||| |||| |||||| |||| |||||||||| Sbjct 626572 TGAATCTTGGCCTTGACGTTTTCGATAGTGTCACTGGGCTCGACCTCCAAGGTAATGGTC 626513 Query 21144 TTGCC 21148 || || Sbjct 626512 TTACC 626508 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422256554810024