Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20divergens_20[genbank_20GCA_5F001077455.1_202014-09-06] 514 sequences; 10,797,556 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq190 102 7e-17 >seq190 Length=1127857 Score = 102 bits (112), Expect = 7e-17 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606 ||| |||||||| ||||| || | ||||| ||| || ||||| || || || | Sbjct 281356 CTCCTTTTGAATATTGTAGTCAGAAAGGGTGCGACCATCTTCAAGCTGCTTGCCCGCAAA 281297 Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666 || ||||||||||| || || || || |||||||| || ||| || || || | Sbjct 281296 AATCAGACGCTGCTGGTCTGGGGGAATACCCTCCTTATCCTGAATCTTGGCCTTGACGTT 281237 Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726 ||||| ||||| || ||||||||| | || | ||||||||||||| ||| ||||| Sbjct 281236 TTCGATAGTGTCACTGGGCTCGACCTCCAAAGTAATGGTTTTGCCGGTCAAAGTCTTTAC 281177 Query 118727 AAAAATCTGCATGG 118740 || || ||||||| Sbjct 281176 GAATATTTGCATGG 281163 Score = 98.7 bits (108), Expect = 9e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||| | ||| | ||| ||| ||||| || ||||| || | ||||| ||| || Sbjct 280735 CACTAGGTGAAGTGTGCTCTCCTTTTGGATATTGTAGTCAGAAAGGGTGCGGCCATCTTC 280676 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||||| || || || | || ||||||||||| || || || || |||||||| || Sbjct 280675 AAGCTGCTTGCCCGCAAAAATCAGACGCTGCTGGTCTGGGGGAATACCCTCCTTATCCTG 280616 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 ||| || || || | ||||| ||||| || ||||||||| | || | ||||| Sbjct 280615 AATCTTGGCCTTGACGTTTTCGATAGTGTCACTGGGCTCGACCTCCAAAGTAATGGTTTT 280556 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCATGG 118740 |||||||| ||| ||||| || || ||||||| Sbjct 280555 GCCGGTCAAAGTCTTTACGAATATTTGCATGG 280524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433827682323688