Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20divergens_20[genbank_20GCA_5F001077455.1_202014-09-06] 514 sequences; 10,797,556 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq232 174 2e-38 >seq232 Length=639093 Score = 174 bits (192), Expect = 2e-38 Identities = 606/927 (65%), Gaps = 28/927 (3%) Strand=Plus/Minus Query 79660 TATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTA 79719 || |||| || ||| ||| |||||| |||| |||||||| | || ||||| ||| Sbjct 594817 TACTGTACGATCTCACAGCACAGGTTAGATGACTTGATGGTTCCCAGGTTCTGTTGGTTA 594758 Query 79720 CTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGAT 79779 |||| || || |||||||| ||||| || || || |||| ||||| || ||| | Sbjct 594757 GACTTTGCATTGCATGCATCCTTGTAAAGCATAAAAGGGTTACCGGTTTCGATTTGACTT 594698 Query 79780 TCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGACTTGTATCTCTTTTCT--C 79837 | | ||| || ||| | | | || || || ||| | || | | Sbjct 594697 TGGAGAATAGCAAACCAAAGTGTTTGGGCAGGAAT---AGTTTTGCGGC-CTAAGCCGGC 594642 Query 79838 TT--TCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGG 79895 || || |||| |||||||| ||||||||| || ||||||||||| | | ||| | Sbjct 594641 TTGTTCATATTTGGTATATAACGCTTCGAACTCATCACCCCAAACATCATACAGTCCGCG 594582 Query 79896 ACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAG 79955 || || ||||| ||||| | | ||| || |||| | | || || |||||||| || Sbjct 594581 GCACTCATCAGGGCACATTAGGGTCCAGTCGCCATTTGCTTCGACACGCTTCATAAACAG 594522 Query 79956 ATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGC--TCCTCGTTTCCTGT 80012 ||| |||||||| || || ||| ||||| || | || | || |||||| ||| Sbjct 594521 ATCCGGAATCCACAGTGC-ATAGAATAGGTCAC--GTGCACGGCTTTCCTCGGATCC--- 594468 Query 80013 ATTCTTTTT----AAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATA 80068 || ||||| ||| || ||||| |||| ||||||| ||||| ||||||| ||||| Sbjct 594467 ATGATTTTTCCGCAAG-TCCAGGAAATCCATGATATCAGCGTGCCATGGTTCCATGTATA 594409 Query 80069 TGGC-CATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 80127 |||| || || ||| || ||| || ||||| |||| || || || || ||| Sbjct 594408 TGGCAAATGAC-CCCTTGCGCTTGCCACCACCCTGGTCTACATACCTTGCAGTTGCATTG 594350 Query 80128 TAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTT 80187 | | | ||||||||| | |||||||||| | |||||||| || ||| || Sbjct 594349 AATATACGCAACATTGGCACAATACCATTGCTCTTCCCATTGGTGCCACGGATGTACGCC 594290 Query 80188 CCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAAT 80247 |||||||| | || || | | || ||||| || || || || ||| ||| Sbjct 594289 CCACTGGCCCTTATTTTGTGACAGGCAAGGCCTATACCGCCAGCACACTTGCTGATGAAT 594230 Query 80248 GCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGA 80307 ||||| | | || || ||| |||| || ||| ||||| |||| | | | Sbjct 594229 GCGCACTGCGTCAATGTCTCAAAGATACCAGCTAATGAGTCATCTTTCATATCCAACAAG 594170 Query 80308 AAACAGCTAGACATTTGGTGACGACTAGTTCCCGCA-TTAAATAAGGTAGGAGAAGCGTG 80366 ||||| || ||||||| ||| | | | | ||| | ||| || || || | ||| || Sbjct 594169 AAACAACTCGACATTT-GTGGCCTTTGGGTACCGGAGAAAAACAACGTCGGCGTAGCATG 594111 Query 80367 CGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATC-CCATT 80425 || || | || | | || || | || |||| ||| | || || || ||| Sbjct 594110 GGTGAAATACTTCTGACTCATCAGGTGATATGTCTGAATCGTACGCTCGATGTCTCCACA 594051 Query 80426 GATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTAT 80485 | ||||| ||| |||| || | ||||||||||||||| || | || ||||||||| | Sbjct 594050 G-TGAATGCCTGCCGCAACTCTCATTAACATGTGCTGCGGGCGCTCTGCGATCTTGTCGT 593992 Query 80486 TTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGT 80545 |||| | | ||| || || | ||| ||||||||||| |||| |||| |||| Sbjct 593991 TTATACGAAGAAGGTATGACCGCTCAAGAGTCTTAAAACCAAAGTAGTCGTATTGGAAGT 593932 Query 80546 CTCGTTCGTAAATAATAACCGAGTTGA 80572 | || |||| ||| | | ||||| Sbjct 593931 CACGCGTGTAATCAATTTCAGCGTTGA 593905 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718264185122960