Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20divergens_20[genbank_20GCA_5F001077455.1_202014-09-06] 514 sequences; 10,797,556 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq190 82.4 6e-11 >seq190 Length=1127857 Score = 82.4 bits (90), Expect = 6e-11 Identities = 139/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 42912 AGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCC 42971 ||||||||||||||| | |||||| || || | || || | || || | || ||||| Sbjct 281362 AGTGCTCTCCTTTTGAATATTGTAGTCAGAAAGGGTGCGACCATCTTCAAGCTGCTTGCC 281303 Query 42972 GGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTG-ATCAACTCTT 43030 |||||||||| ||||| || || | || | ||| || || || ||| ||| | | Sbjct 281302 CGCAAAAATCAGACGCTGCTGGTCTGGGGGAATACCCTCCTTATC-CTGAATCTTGGCCT 281244 Query 43031 TGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAG 43090 |||| | | | ||||| | | |||||| || | || || ||||| ||||| | || Sbjct 281243 TGACGTTTTCGATAGTGTCACTGGGCTCGACCTCCAAAGTAATGGTTTTGCCGGTCAAAG 281184 Query 43091 TTTTCACAAAAATTTGCAT 43109 | || || || |||||||| Sbjct 281183 TCTTTACGAATATTTGCAT 281165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381367210957812