Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20divergens_20[genbank_20GCA_5F001077455.1_202014-09-06] 514 sequences; 10,797,556 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq2 111 2e-20 >seq2 Length=2195431 Score = 111 bits (122), Expect = 2e-20 Identities = 184/266 (69%), Gaps = 0/266 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || |||||||| |||| | | || || |||||||| || || |||||||| || ||| Sbjct 1644572 GCCAAGCGTCACCGCAAGGTTTTGCGTGACAACATCCAGGGTATTACCAAGCCTGCCATC 1644513 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || | |||||||| | ||||| || |||||| | || || ||| | || || ||| | Sbjct 1644512 CGCAGATTGGCTCGTAGGGGTGGTGTAAAGCGTATTTCCGGTTTGATTTACGAGGAGGTC 1644453 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| |||| | ||| | ||||| ||| ||| || || || || ||| |||||| Sbjct 1644452 CGTGGTGTTCTTAAGGTTTTCCTTGAGAACGTCATTAGGGACTCTGTCACCTACACCGAG 1644393 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| | |||||||| || | ||||| || || || | |||| | || ||| Sbjct 1644392 CACGCCCGCAGGAAGACTGTGACTGCTATGGACATTGTGTACTCCCTGAAGAGACAGGGC 1644333 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTA 16698 | | |||| ||||| || |||| Sbjct 1644332 AGGACCCTTTACGGTTTCGGTGGTTA 1644307 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074730046202