Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20divergens_20[genbank_20GCA_5F001077455.1_202014-09-06] 514 sequences; 10,797,556 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq190 102 8e-17 >seq190 Length=1127857 Score = 102 bits (112), Expect = 8e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| | | ||| ||||||| || | || |||||||||||| ||||| || Sbjct 281392 GCCACCCCTGAGACGAAGCACTAGGTGAAGAGTGCTCTCCTTTTGAATATTGTAGTCAGA 281333 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | |||||| || || ||||||||||| || | || | |||||||||||| || || Sbjct 281332 AAGGGTGCGACCATCTTCAAGCTGCTTGCCCGCAAAAATCAGACGCTGCTGGTCTGGGGG 281273 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || || || || || ||||| | || | ||| || ||| ||||| Sbjct 281272 AATACCCTCCTTATCCTGAATCTTGGCCTTGACGTTTTCGATAGTGTCACTGGGCTCGAC 281213 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | |||| |||||| ||||| | ||| |||||||| || |||||| Sbjct 281212 CTCCAAAGTAATGGTTTTGCCGGTCAAAGTCTTTACGAATATTTGCATG 281164 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 131019 ACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGA 131078 ||| ||||||| || | || ||||||||| || ||||| || | |||||| Sbjct 280741 ACGAAGCACTAGGTGAAGTGTGCTCTCCTTTTGGATATTGTAGTCAGAAAGGGTGCGGCC 280682 Query 131079 GTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTT 131138 || || ||||||||||| || | || | |||||||||||| || || || || || || Sbjct 280681 ATCTTCAAGCTGCTTGCCCGCAAAAATCAGACGCTGCTGGTCTGGGGGAATACCCTCCTT 280622 Query 131139 GTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAAC 131198 || || || ||||| | || | ||| || ||| ||||| || | |||| Sbjct 280621 ATCCTGAATCTTGGCCTTGACGTTTTCGATAGTGTCACTGGGCTCGACCTCCAAAGTAAT 280562 Query 131199 GGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||||| ||||| | ||| |||||||| || |||||| Sbjct 280561 GGTTTTGCCGGTCAAAGTCTTTACGAATATTTGCATG 280525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472009767317760