Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20divergens_20[genbank_20GCA_5F001077455.1_202014-09-06] 514 sequences; 10,797,556 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq190 129 5e-25 >seq190 Length=1127857 Score = 129 bits (142), Expect = 5e-25 Identities = 163/222 (73%), Gaps = 8/222 (4%) Strand=Plus/Plus Query 24993 GGAACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAG 25052 || || ||||||||||| ||||||||||||||||| ||| |||| || | || || ||| Sbjct 281159 GGCACCATGCAAATATTCGTAAAGACTTTGACCGGCAAAACCATTACTTTGGAGGTCGAG 281218 Query 25053 TCGTCTGACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCC 25108 | |||||||||||| |||| | || || | ||| || || || || ||||| Sbjct 281219 CCCAGTGACACTATCGAAAACGTCA---AGGCCAAGATTCAG-GATAAGGAGGGTATTCC 281274 Query 25109 ACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGG 25168 || ||||| ||||| | |||||||| ||||| || | ||||||| |||||| | Sbjct 281275 CCCAGACCAGCAGCGTCTGATTTTTGCGGGCAAGCAGCTTGAAGATGGTCGCACCCTTTC 281334 Query 25169 CGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || |||||||||||||| || ||| || || ||||||| Sbjct 281335 TGACTACAATATTCAAAAGGAGAGCACTCTTCACCTAGTGCT 281376 Score = 123 bits (136), Expect = 2e-23 Identities = 171/237 (72%), Gaps = 8/237 (3%) Strand=Plus/Plus Query 24993 GGAACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAG 25052 || || ||||||||||| ||||||||||||||||| ||| |||| || | || || ||| Sbjct 280520 GGCACCATGCAAATATTCGTAAAGACTTTGACCGGCAAAACCATTACTTTGGAGGTCGAG 280579 Query 25053 TCGTCTGACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCC 25108 | |||||||||||| |||| | || || | ||| || || || || ||||| Sbjct 280580 CCCAGTGACACTATCGAAAACGTCA---AGGCCAAGATTCA-GGATAAGGAGGGTATTCC 280635 Query 25109 ACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGG 25168 || ||||| ||||| | |||||||| ||||| || | ||||||| ||||| | Sbjct 280636 CCCAGACCAGCAGCGTCTGATTTTTGCGGGCAAGCAGCTTGAAGATGGCCGCACCCTTTC 280695 Query 25169 CGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || |||||||| ||||| || ||| || || ||||||| | || || ||||| Sbjct 280696 TGACTACAATATCCAAAAGGAGAGCACACTTCACCTAGTGCTTCGTCTCAGGGGAGG 280752 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433325285470910