Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20divergens_20[genbank_20GCA_5F001077455.1_202014-09-06] 514 sequences; 10,797,556 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq190 113 8e-20 seq2 104 4e-17 >seq190 Length=1127857 Score = 113 bits (124), Expect = 8e-20 Identities = 131/177 (74%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 68258 GTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTG 68317 ||| || ||| ||| ||||||||||| || || || || || | |||||||| | ||| Sbjct 626684 GTGAAGAGTGCTCTCCTTTTGGATGTTGTAGTCCGAAAGAGTACGGCCATCTTCAAGCTG 626625 Query 68318 CTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTT 68377 ||| || || || || || | || ||||| || ||||| || ||||| || |||||||| Sbjct 626624 CTTGCCCGCAAAAATCAGACGCTGCTGGTCTGGGGGAATACCCTCCTTATCCTGAATCTT 626565 Query 68378 TGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCC 68434 ||||||||| ||||| ||||| | || || |||||||| ||||| || || Sbjct 626564 GGCCTTGACGTTTTCGATAGTGTCACTGGGCTCGACCTCCAAGGTAATGGTCTTACC 626508 >seq2 Length=2195431 Score = 104 bits (114), Expect = 4e-17 Identities = 180/259 (69%), Gaps = 2/259 (1%) Strand=Plus/Plus Query 176318 ATTGATGTTATTCGAACCCACGTAGTCTTGGGCCATTCCGACTATGGCGCCCTGGAGAGA 176377 |||||||||||| || |||||| |||| || ||||| || || | ||| || || Sbjct 840548 ATTGATGTTATTTGATCCCACGAAGTCCTGTGCCATATTGATGATCGTTTGCTGTAGTGA 840607 Query 176378 CGCCTCGCCGTGGTGATAGCCGGCGTTCTCACTTGTGTATCCGGCAAACTGCGCGACTTT 176437 |||||| ||||||||||| | | | ||| | ||| || | | ||||| || || Sbjct 840608 CGCCTCCCCGTGGTGATAAGCCGAATGCTCTGCTACGTACCCAGTGAGTTGCGCTACCTT 840667 Query 176438 GATTTCTTGTACGAGGTTGCGCTTCA-ACGCCGAGAACAGAATCTTCCGCTGCGAGGGCT 176496 ||| ||| ||||| ||||| | || | ||| |||| ||| |||||| |||| Sbjct 840668 ACATTCAGCTACTAGGTTACGCTTGAGACAAC-CGAATAGAACCTTACGCTGCCCAGGCT 840726 Query 176497 TCAGACCATCGACGACCGACGGAATGGAACGCTCTACATCGTATCTTGAAAAAAGGATAA 176556 || |||||||| || || || ||| ||| || |||||| | || || |||||| Sbjct 840727 TCCACCCATCGACTACGGAGGGTATGCTACGTTCGGTATCGTAAATGGAGAACTGGATAA 840786 Query 176557 GGTCTTTGTTTATGAAATC 176575 | || ||||| |||||||| Sbjct 840787 GTTCCTTGTTAATGAAATC 840805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921616478576080