Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20divergens_20[genbank_20GCA_5F001077455.1_202014-09-06] 514 sequences; 10,797,556 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq232 178 2e-39 >seq232 Length=639093 Score = 178 bits (196), Expect = 2e-39 Identities = 924/1458 (63%), Gaps = 36/1458 (2%) Strand=Plus/Minus Query 243868 CAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGGCCATGGT 243927 |||| ||| |||||| || ||| ||| || | || | || ||||| ||||| Sbjct 595655 CAGATAGATGTTGAGCGATTGGGACTGATCAATAAATATGCCACGATCTGCTGCCATATC 595596 Query 243928 GATGAGGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGTGCTCGGG 243987 |||| ||||| ||| || || | |||||||| | | ||||| ||| | || Sbjct 595595 AATGATAGTTTTCTGTTTTATTTCCCACACTGTCTTGTACAGGTCCTTGATGTGTTGAGG 595536 Query 243988 GAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGCATGTTATC 244047 | || ||||||| | || || || || | | | || |||| ||| || Sbjct 595535 AATACCCTCGATGTGCCTCAAGGAACCGTTATAGGCAATCAGCTTTTCCTTCATAGCTTC 595476 Query 244048 GTTCCACAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCTGTTCACCACCTGAAACTC 244107 || ||| || || || | | || || | |||||| ||| ||||| ||||| Sbjct 595475 GTCCCAGAGCCCTAAATCCACGAGGTCCCGTAGCAGGTGGGGGTTTACCACAAAGAACTC 595416 Query 244108 TCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTT 244167 ||| ||||| ||||| | ||| | ||||||| || ||||||| | ||| |||| Sbjct 595415 TCCGCTAAGCACACGGCGGTAGTAAATGTTGCTGGTGTATGGCTCGAAGGACTCGTTGTT 595356 Query 244168 GCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACTGTTCCTCAC 244227 ||||| || || | || || ||||||||||| | || | || ||| | || Sbjct 595355 TCCCAGGATTTGGGATGTCGATGCGGTCGGCATGGGGGCCAGGAACAACGAGTTACGCAG 595296 Query 244228 GCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGCCCGAGAGGTCCTC 244287 |||||| | |||||| | | || |||| ||||||||| | | | |||| | Sbjct 595295 ACCGTGCTTGGCCATGCGGCGCTTAAGATCGTCCCAGTCCCATAA---CTTGTTGTCCAC 595239 Query 244288 GCGTTTGAGGCCCCACATGTCAAACTGCAGCA-GCCCCTTGCTGACGGGGCTGCCCTCGT 244346 || |||||| | ||| ||||||||| ||| ||| | || | | ||| || Sbjct 595238 AG---TGGCGCCCCAAAGGTCGAACTGCAGCTTGCCTTTTGAGGCTGGCGAT-CCCGGGT 595183 Query 244347 AGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTCGTCGAGGGCGGCGTAGT 244406 | | | || | ||| || || | ||||| | | ||| || || |||||| Sbjct 595182 ACGACTCATACGTACCATCACGTTCGGCCAACGAAATAGACTCATCCAGACAACCGTAGT 595123 Query 244407 AGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGT--GAAGGGGAT 244464 | || |||||||| || ||| | || ||| | || ||| | ||| ||| Sbjct 595122 AAATCGTCTCGAATATACGGCGGTTAAGTTCCTTGGCTT--CCTCAGATTCGAACGGGTA 595065 Query 244465 GCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCG 244524 || ||||| ||| ||| ||| |||| |||||||| || | || || |||||||| || Sbjct 595064 GCGCATCAGCATAAAGGTGTCCGCCAAACCCTGCACTCCTACACCAATAGGTCTGTGGCG 595005 Query 244525 CTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAG 244584 | ||||| | | || || ||||| || || |||| | ||| || | |||||||| Sbjct 595004 ATGATTGGACACCTTCGCCTCCGGCACAGGATAGTAGTTTCTGTCAATGATTTTGTTGAG 594945 Query 244585 GTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGTAGGGATC 244644 |||| || || | ||| ||| ||| || | || ||||||||| | || || Sbjct 594944 GTTGTATGTAATGACACGGGAGACTTCGTACAACTTTTGGAAGTCGTACGTGCGGGTTTC 594885 Query 244645 CTCGGCGATGGTGATCCTCACAAAC-TCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGG 244703 || | ||||| || ||| || || | | ||||||||||| || | Sbjct 594884 CTTGT------------TCACATACATCGGC-AGCGCAATGGAAGCCAGGTTGCACACTG 594838 Query 244704 CCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGG 244763 ||||||| || | | |||||||| || ||||| ||| |||||| ||||||||| Sbjct 594837 CCACCTCTTCTGGGGATGTGTACTGTACGATCTCACAGCACAGGTTAGATGACTTGATGG 594778 Query 244764 TGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCC 244823 | ||||||| ||| || || ||||| || ||||| || |||||||| ||||| || || Sbjct 594777 TTCCCAGGTTCTGTTGGTTAGACTTTGCATTGCATGCATCCTTGTAAAGCATAAAAGGGT 594718 Query 244824 CCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTG-ACCGTC 244882 ||||| |||| || ||| | ||| | || | | | | | || Sbjct 594717 TACCGGTTTCGATTTGACTTTGGAGAATAGCAAACCA-AAGTGTTTGGGCAGGAATAGTT 594659 Query 244883 CTGCGAGCCT-TGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCA 244941 |||| |||| ||| || || || ||| || | || |||||||| ||||| Sbjct 594658 TTGCG-GCCTAAGCCGGCTTGTTCATATTTGGTATATAACGCTTCGAACTCATCACCCCA 594600 Query 244942 GACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGCCGCCGTCCTT 245001 || || | || ||| ||||| | |||||||| || |||| ||||| | | Sbjct 594599 AACATCATACAGTCCGCGGCACTCATCAGGGCACATTAGGGTCCAGTCGCCATTTGCTTC 594540 Query 245002 GACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTG 245061 ||| | || ||| || || || || ||||| || || | ||| ||||| | || | | | Sbjct 594539 GACACGCTTCATAAACAGATCCGGAATCCACAGTGCATAGAATAGGTCAC--GTGCACGG 594482 Query 245062 C--TCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAG 245119 | || || || ||| || |||| || |||| || || | || || ||||||| Sbjct 594481 CTTTCCTCGGATCCATGATTTTTCCGCAAGTCCAGGAAATCCATGATATCAGCGTGCCAT 594422 Query 245120 GGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTC 245179 || |||||||| | || | | || |||||| || |||||||| || ||| Sbjct 594421 GGTTCCATGTATATGGCAAATGACCCCTTGCGCTTGCCACCACCCTGGTCTACATACCTT 594362 Query 245180 TCGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCC 245239 | || ||||| || |||| | ||||| || || || | || |||||||| Sbjct 594361 GCAGTTGCATTGAATATACGCAACATTGGCACAATACCATTGCTCTTCCCATTGGTGCCA 594302 Query 245240 TTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGA-TGGACATGCCTAGTCCGCCGGCGTG 245298 |||||| || || || |||| | ||| ||| || | ||||| ||||| || Sbjct 594301 CGGATGTACGCCCCACTGGCCCTTATTTTG-TGACAGGCAAGGCCTATACCGCCAGCACA 594243 Query 245299 CTTGGAGATGAGGGCGCA 245316 |||| ||||| ||||| Sbjct 594242 CTTGCTGATGAATGCGCA 594225 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944333132620640