Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20divergens_20[genbank_20GCA_5F001077455.1_202014-09-06] 514 sequences; 10,797,556 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq232 197 2e-45 >seq232 Length=639093 Score = 197 bits (218), Expect = 2e-45 Identities = 1042/1648 (63%), Gaps = 37/1648 (2%) Strand=Plus/Minus Query 113603 TAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGACAACTTG 113662 ||||| | ||| |||||||| |||| |||||| |||| | ||||| | | ||| Sbjct 595732 TAGTAAACCCCGGTCTTGAGTCCCTTCTTCCATCCATAGAAGTGCATGCTCGTGAGTTTG 595673 Query 113663 GAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCA 113722 || | || |||| ||| ||| | |||||| ||||| || || ||| Sbjct 595672 CCGAAGGAAGGCTGCTCCAGATAGATGTTGAGCGATTGGGACTGATCAATAAATATGCCA 595613 Query 113723 CGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGG 113782 ||||| || ||||||||||| | | ||| || ||||||||||| || |||| ||| Sbjct 595612 CGATCTGCTGCCATATCAATGATAGTTTTCTGTTTTATTTCCCACACTGTCTTGTACAGG 595553 Query 113783 TTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCCTTGACCATG 113842 | ||| || | | || ||| || |||| | | ||| ||| | | | || Sbjct 595552 TCCTTGATGTGTTGAGGAATACCCTCGATGTGCCTCAAGGA---ACCGTTATAGGCAATC 595496 Query 113843 AGAT---CCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGC 113899 || | |||||||| | | |||||| || | | ||| ||| | || || Sbjct 595495 AGCTTTTCCTTCATAGCTTCGTCCCAGAGCCCTAAATCCACGAGGTCCCGTAGCAGGTGG 595436 Query 113900 TTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTAT 113959 || || |||| ||||| || || || | || || ||| | |||||| Sbjct 595435 GGGTTTACCACAAAGAACTCTCCGCTAAGCACACGGCGGTAGTAAATGTTGCTGGTGTAT 595376 Query 113960 GGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCC 114019 ||||| ||| |||| ||||| |||| |||||||| || || || || |||||||| ||| Sbjct 595375 GGCTCGAAGGACTCGTTGTTTCCCAGGATTTGGGATGTCGATGCGGTCGGCATGGGGGCC 595316 Query 114020 ATGAGAAGGCTGTTACGGAGACCCT--TTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGT 114077 | || | |||||| ||||| | || || ||||| ||| || ||||||||| Sbjct 595315 AGGAACAACGAGTTACGCAGACCGTGCTTGGCC--ATGCGGCGCTTAAGATCGTCCCAGT 595258 Query 114078 CGTAGTTGAGCTTTGTCTCCCCCT----GCCACATA--TCAAACTGGAGGATACCTTGGG 114131 | | | ||| | ||| | ||| || | || ||||| || | |||| | Sbjct 595257 CCCAT---AACTTGTTGTCCACAGTGGCGCCCCAAAGGTCGAACTGCAGCTTGCCTTTTG 595201 Query 114132 AGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCT-- 114189 |||||||||||||| | | ||| || | || ||| || ||||| || | Sbjct 595200 AGGCTGGCGATCCCGGGTACGACTCATACGTACCATCACGTTCGGCCAA--CGAAATAGA 595143 Query 114190 CGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTC 114249 | | || || ||| || || ||||| || || || || | | ||||||| || Sbjct 595142 CTCATCCAGACAACCGTAGTAAATCGTCTCGAATATACGGCGGTTAAGTTCCTTGGCTTC 595083 Query 114250 GTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAG 114309 || || || |||| | || || ||||| ||||| | ||| || || || | Sbjct 595082 CTCAGATTCGAACGGGTAGCGCATCAGCATAAAGGTGTCCGCCAAACCCTGCACTCCTAC 595023 Query 114310 GCCAATTGGGCGATGTCTCATATTAGACT--TTCGAGCGGTCTCCACGGGATAAAAATTC 114367 ||||| || | || | ||| ||| |||| | | ||| ||||| | || Sbjct 595022 ACCAATAGGTCTGTGGCGATGATTGGACACCTTCG--CCTCCGGCACAGGATAGTAGTTT 594965 Query 114368 CTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCG 114427 || || || | | || || || | || | || | || ||| | | ||||| | Sbjct 594964 CTGTCAATGATTTTGTTGAGGTTGTATGTAATGACACGGGAGACTTCGTACAACTTTTGG 594905 Query 114428 TAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTA 114487 | || | |||| || || | || |||||| | || || || || || ||||| || Sbjct 594904 AAGTCGTACGTGCGGGTTTCCTTGTTCACATACATCGGCAGCGCAATGGAAGCCAGGTTG 594845 Query 114488 CACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTC 114547 ||||| | ||| || ||||||| || || || |||| || || | Sbjct 594844 CACACTGCCACCTCTTCTGGGGATGTGTACTGTACGATCTCACAGCACAGGTTAGATGAC 594785 Query 114548 TTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATG 114607 || ||||| |||| ||||| ||| || ||||||| || || ||||||||||||||||| Sbjct 594784 TTGATGGTTCCCAGGTTCTGTTGGTTAGACTTTGCATTGCATGCATCCTTGTAAAGCATA 594725 Query 114608 TATGGCGTCCCCGTCTCCGTTTGGGACTT--GAGAATAGCCTTCCAGACATCGGCGGCTG 114665 | || | || || || |||| |||| ||||||||| ||| | ||| | Sbjct 594724 AAAGGGTTACCGGTTTCGATTTG--ACTTTGGAGAATAGCAAACCAAAGTGTTTGGGCAG 594667 Query 114666 GCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTT 114725 | | ||| | | || || | | || || || || || | ||||| ||||| | Sbjct 594666 GAATAGTTTTGCGGCCTAAGCCGGCTTGTTCATATTTGGTATATAACGCTTCGAACTCAT 594607 Query 114726 CACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCAC 114785 ||||| | || | || || | || ||| ||||| | || | ||| | ||| Sbjct 594606 CACCCCAAACATCATACAGTCCGCGGCACTCATCAGGGCACATTAGGGTCCAGTCGCCAT 594547 Query 114786 CCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGAC 114845 | || ||||||||||| || || || || ||||| || || |||| || || || Sbjct 594546 TTGCTTCGACACGCTTCATAAACAGATCCGGAATCCACAGTGCATAGAATAGGTCACGTG 594487 Query 114846 AGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGT 114905 || ||| || || ||||| ||||| |||| || ||||||||||| |||| Sbjct 594486 CACGGCTTTCCTCGGATCCATGATTTTTCCGCAAGTCCAGGAAATCCATGATATCAGCGT 594427 Query 114906 GCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACGACCAGCCTGGTTTACAT 114962 |||| ||||||| ||| | || | ||||||||| || | |||| |||||| ||||| Sbjct 594426 GCCATGGTTCCATGTATATGGCAAATGACCCCTTGCGCTTGCCACCACCCTGGTCTACAT 594367 Query 114963 ACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTG 115022 |||| || || ||||| |||| || | |||||| | ||||||| | ||||| | Sbjct 594366 ACCTTGCAGTTGCATTGAATATACGCAACATTGGCACAATACCATTGCTCTTCCCATTGG 594307 Query 115023 TCCCCCGAATACGAGACTTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTG 115082 | || || || | | | |||| || | | || | | || ||||| || | Sbjct 594306 TGCCACGGATGTACGCCCCACTGGCCCTTATTTTGTGACAGGCAAGGCCTATACCGCCAG 594247 Query 115083 CCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCAC 115142 | ||||| ||| ||||||| ||| | | | |||| || | | |||||| Sbjct 594246 CACACTTGCTGATGAATGCGCACTGCGTCAATGTCTCAAAGATACCAGCTAATGAGTCAT 594187 Query 115143 CCTT-ATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAG 115201 | || || | | | || ||| || |||||||||||||||||| | ||||| | | || Sbjct 594186 CTTTCATATCCAACAA-GAAACAACTCGACATTTGTGGCCTTTGGGTACCGGAGAAAAAC 594128 Query 115202 AGGGTTGGTGTCGCGTGGATGAACATAC 115229 | || || || || ||| |||| |||| Sbjct 594127 AACGTCGGCGTAGCATGGGTGAA-ATAC 594101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597349762003120