Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20divergens_20[genbank_20GCA_5F001077455.1_202014-09-06] 514 sequences; 10,797,556 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq190 141 9e-29 >seq190 Length=1127857 Score = 141 bits (156), Expect = 9e-29 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||||||||| |||| || || |||||||| ||||| || | | |||||| | || Sbjct 281377 AAGCACTAGGTGAAGAGTGCTCTCCTTTTGAATATTGTAGTCAGAAAGGGTGCGACCATC 281318 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 ||||||||||||||| ||| |||| || ||||||||||| || ||||| || || || || Sbjct 281317 TTCAAGCTGCTTGCCCGCAAAAATCAGACGCTGCTGGTCTGGGGGAATACCCTCCTTATC 281258 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || || || ||| || || | || |||| || || || || | ||| | ||| Sbjct 281257 CTGAATCTTGGCCTTGACGTTTTCGATAGTGTCACTGGGCTCGACCTCCAAAGTAATGGT 281198 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||||||||||| |||||||| |||||||| Sbjct 281197 TTTGCCGGTCAAAGTCTTTACGAATATTTGCAT 281165 Score = 136 bits (150), Expect = 4e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||||||||| |||| || || ||||| || ||||| || | | |||||| | || Sbjct 280738 AAGCACTAGGTGAAGTGTGCTCTCCTTTTGGATATTGTAGTCAGAAAGGGTGCGGCCATC 280679 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 ||||||||||||||| ||| |||| || ||||||||||| || ||||| || || || || Sbjct 280678 TTCAAGCTGCTTGCCCGCAAAAATCAGACGCTGCTGGTCTGGGGGAATACCCTCCTTATC 280619 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || || || ||| || || | || |||| || || || || | ||| | ||| Sbjct 280618 CTGAATCTTGGCCTTGACGTTTTCGATAGTGTCACTGGGCTCGACCTCCAAAGTAATGGT 280559 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||||||||||| |||||||| |||||||| Sbjct 280558 TTTGCCGGTCAAAGTCTTTACGAATATTTGCAT 280526 Score = 89.7 bits (98), Expect = 5e-13 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||||||||| |||| || || ||||| |||||||| || | | || || | || Sbjct 626693 AAGCACTAGGTGAAGAGTGCTCTCCTTTTGGATGTTGTAGTCCGAAAGAGTACGGCCATC 626634 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 ||||||||||||||| ||| |||| || ||||||||||| || ||||| || || || || Sbjct 626633 TTCAAGCTGCTTGCCCGCAAAAATCAGACGCTGCTGGTCTGGGGGAATACCCTCCTTATC 626574 Query 64351 TTGTATTTT 64359 || || || Sbjct 626573 CTGAATCTT 626565 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499641589782160