Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20divergens_20[genbank_20GCA_5F001077455.1_202014-09-06] 514 sequences; 10,797,556 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq232 96.9 3e-15 >seq232 Length=639093 Score = 96.9 bits (106), Expect = 3e-15 Identities = 220/328 (67%), Gaps = 10/328 (3%) Strand=Plus/Plus Query 94060 GCCAGGGGTTCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTC 94119 ||||| || | |||||||| || |||||||| | ||| || | || || ||| | Sbjct 594282 GCCAGTGGGGCGTACATCCGTGGCACCAATGGGAAGAGCAATGGTATTGTGCCAATGTTG 594341 Query 94120 CGGGTCTTCAA--CAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTT 94177 || | ||||| |||| || | || || |||||||||||||| | | | ||||| | Sbjct 594342 CGTATATTCAATGCAACT--GCAAGGTATGTAGACCAGGGTGGTGGCAAGCGCAAGGGGT 594399 Query 94178 CTTTCGCGGTCTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAA 94237 | || || | || | || || |||||||| || | || |||| | ||| |||| | Sbjct 594400 CATTTGCCATATACATGGAACCATGGCACGCTGATATCATGGATTTCCTGGACTTGCGGA 594459 Query 94238 AGAACCACGGCAACGATCTGGAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGC 94294 | || || || ||| ||| | | || | ||||| ||||| || || ||| | | Sbjct 594460 AAAATCATGGATCCGA---GGAAAGCCGTGCACGTGACCTATTCTATGCACTGTGGATTC 594516 Query 94295 CAGACCTTTTTATGAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATG 94354 | || || |||||||| || ||||| ||| || ||||| || | || || ||| Sbjct 594517 CGGATCTGTTTATGAAGCGTGTCGAAGCAAATGGCGACTGGACCCTAATGTGCCCTGATG 594576 Query 94355 AATGTCCCGGACTGTCCGACGTTTGTGG 94382 | || | |||||||| || ||||| || Sbjct 594577 AGTGCCGCGGACTGTATGATGTTTGGGG 594604 Score = 93.3 bits (102), Expect = 4e-14 Identities = 142/199 (71%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 95044 GACTGGGAAGCTCT-ACGCGCTG-ATGTTATCAAACACGGTGTGAAAAACGCGCTGCTTG 95101 |||||||| | ||| | |||| | ||| ||| |||||| || ||| || || | Sbjct 595257 GACTGGGACGATCTTAAGCGCCGCATGGC--CAAGCACGGTCTGCGTAACTCGTTGTTCC 595314 Query 95102 TGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAAC 95161 ||||||||||||| || || || || | || ||||| || ||||||||||| ||||| | Sbjct 595315 TGGCCCCCATGCCGACCGCATCGACATCCCAAATCCTGGGAAACAACGAGTCCTTCGAGC 595374 Query 95162 CCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAACA 95221 | | |||| |||| | ||| || | || ||||| ||| || ||| || | ||| Sbjct 595375 CATACACCAGCAACATTTACTACCGCCGTGTGCTTAGCGGAGAGTTCTTTGTGGTAAACC 595434 Query 95222 AGCACCTCCTACGGGACCT 95240 ||||| ||||||||||| Sbjct 595435 CCCACCTGCTACGGGACCT 595453 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494720021403440